Literature DB >> 10393241

RNA editing in an untranslated region of the Ginkgo chloroplast genome.

J Kudla1, R Bock.   

Abstract

mRNAs in plant cell organelles can be subject to RNA editing, an RNA processing step altering the identity of single nucleotide residues. In higher plant chloroplasts, editing proceeds by C-to-U conversions at highly specific sites. All known plastid RNA editing sites are located in protein-coding regions and, typically, change the coding properties of the mRNA. To gain more insight into the evolution of editing, we have determined the molecular structure and RNA editing pattern of the psbE operon of the primitive seed plant Ginkgo biloba. We report here the identification of altogether four sites of C-to-U editing, two of which are unique to Ginkgo and have not been found in other species. Surprisingly, one of the sites is located in an intercistronic spacer, thus being the first chloroplast editing site detected outside a protein-coding region. This indicates that the plastid editing machinery can operate also in untranslated regions and without having apparent functional consequences.

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Year:  1999        PMID: 10393241     DOI: 10.1016/s0378-1119(99)00177-8

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  11 in total

1.  RNA editing in hornwort chloroplasts makes more than half the genes functional.

Authors:  Masanori Kugita; Yuhei Yamamoto; Takeshi Fujikawa; Tohoru Matsumoto; Koichi Yoshinaga
Journal:  Nucleic Acids Res       Date:  2003-05-01       Impact factor: 16.971

2.  Rapid evolution of RNA editing sites in a small non-essential plastid gene.

Authors:  Andreas Fiebig; Sandra Stegemann; Ralph Bock
Journal:  Nucleic Acids Res       Date:  2004-07-07       Impact factor: 16.971

3.  Faithful editing of a tomato-specific mRNA editing site in transgenic tobacco chloroplasts.

Authors:  Daniel Karcher; Sabine Kahlau; Ralph Bock
Journal:  RNA       Date:  2007-12-07       Impact factor: 4.942

4.  High conservation of a 5' element required for RNA editing of a C target in chloroplast psbE transcripts.

Authors:  Michael L Hayes; Maureen R Hanson
Journal:  J Mol Evol       Date:  2008-08-12       Impact factor: 2.395

5.  RNA editing events in mitochondrial genes by ultra-deep sequencing methods: a comparison of cytoplasmic male sterile, fertile and restored genotypes in cotton.

Authors:  Hideaki Suzuki; Jiwen Yu; Scott A Ness; Mary A O'Connell; Jinfa Zhang
Journal:  Mol Genet Genomics       Date:  2013-06-29       Impact factor: 3.291

6.  Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes.

Authors:  Sabine Kahlau; Sue Aspinall; John C Gray; Ralph Bock
Journal:  J Mol Evol       Date:  2006-07-07       Impact factor: 2.395

7.  Establishment of a Heterologous RNA Editing Event in Chloroplasts.

Authors:  Filomena Vanessa Loiacono; Wolfram Thiele; Mark Aurel Schöttler; Michael Tillich; Ralph Bock
Journal:  Plant Physiol       Date:  2019-09-13       Impact factor: 8.340

8.  Identification of protein stability determinants in chloroplasts.

Authors:  Wiebke Apel; Waltraud X Schulze; Ralph Bock
Journal:  Plant J       Date:  2010-08       Impact factor: 6.417

9.  Plastid transcriptomics and translatomics of tomato fruit development and chloroplast-to-chromoplast differentiation: chromoplast gene expression largely serves the production of a single protein.

Authors:  Sabine Kahlau; Ralph Bock
Journal:  Plant Cell       Date:  2008-04-25       Impact factor: 11.277

10.  Post-transcriptional control of chloroplast gene expression.

Authors:  Eva M del Campo
Journal:  Gene Regul Syst Bio       Date:  2009-03-12
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