Literature DB >> 10383862

Ribosomal DNA sequencing as a tool for identification of bacterial pathogens.

C P Kolbert1, D H Persing.   

Abstract

Conventional methods for the identification and characterization of clinical isolates of bacterial pathogens sometimes fall short when such isolates exhibit unusual phenotypic profiles. Recent advances in DNA sequencing technology have greatly enhanced the ability of the microbiologist to determine the identity of a bacterial isolate. Given the relative objectivity of DNA sequence information and growing availability of sequence information databases, a significant movement is now afoot to use molecular methods for the identification of clinical pathogens.

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Year:  1999        PMID: 10383862     DOI: 10.1016/S1369-5274(99)80052-6

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  60 in total

1.  Biochemical and susceptibility tests useful for identification of nonfermenting gram-negative rods.

Authors:  Kim Laffineur; Michèle Janssens; Jacqueline Charlier; Véronique Avesani; Georges Wauters; Michel Delmée
Journal:  J Clin Microbiol       Date:  2002-03       Impact factor: 5.948

2.  Direct identification of bacteria from positive blood cultures by amplification and sequencing of the 16S rRNA gene: evaluation of BACTEC 9240 instrument true-positive and false-positive results.

Authors:  Q Qian; Y W Tang; C P Kolbert; C A Torgerson; J G Hughes; E A Vetter; W S Harmsen; S O Montgomery; F R Cockerill; D H Persing
Journal:  J Clin Microbiol       Date:  2001-10       Impact factor: 5.948

3.  Bacterial identification for publication: when is enough enough?

Authors:  J Michael Janda; Sharon L Abbott
Journal:  J Clin Microbiol       Date:  2002-06       Impact factor: 5.948

4.  BIBI, a bioinformatics bacterial identification tool.

Authors:  G Devulder; G Perrière; F Baty; J P Flandrois
Journal:  J Clin Microbiol       Date:  2003-04       Impact factor: 5.948

Review 5.  Next-generation sequencing in the analysis of human microbiota: essential considerations for clinical application.

Authors:  Geraint B Rogers; Kenneth D Bruce
Journal:  Mol Diagn Ther       Date:  2010-12-01       Impact factor: 4.074

6.  Identification of bacteria recovered from clinical specimens by 16S rRNA gene sequencing.

Authors:  P Kiratisin; L Li; P R Murray; S H Fischer
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2003-10-01       Impact factor: 3.267

7.  Ribosomal DNA sequencing for identification of aerobic gram-positive rods in the clinical laboratory (an 18-month evaluation).

Authors:  P P Bosshard; S Abels; R Zbinden; E C Böttger; M Altwegg
Journal:  J Clin Microbiol       Date:  2003-09       Impact factor: 5.948

8.  Comparison of conventional and molecular methods for identification of aerobic catalase-negative gram-positive cocci in the clinical laboratory.

Authors:  P P Bosshard; S Abels; M Altwegg; E C Böttger; R Zbinden
Journal:  J Clin Microbiol       Date:  2004-05       Impact factor: 5.948

9.  Presence of bacterial phage-like DNA sequences in commercial Taq DNA polymerase reagents.

Authors:  Tamara Newsome; Bing-Jie Li; Nianxiang Zou; Shyh-Ching Lo
Journal:  J Clin Microbiol       Date:  2004-05       Impact factor: 5.948

10.  Bacterial classification of fish-pathogenic Mycobacterium species by multigene phylogenetic analyses and MALDI Biotyper identification system.

Authors:  Satoru Kurokawa; Jun Kabayama; Tsuguaki Fukuyasu; Seong Don Hwang; Chan-Il Park; Seong-Bin Park; Carmelo S del Castillo; Jun-ichi Hikima; Tae-Sung Jung; Hidehiro Kondo; Ikuo Hirono; Haruko Takeyama; Takashi Aoki
Journal:  Mar Biotechnol (NY)       Date:  2012-11-16       Impact factor: 3.619

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