Literature DB >> 10383414

Functional characterization of the D-Tyr-tRNATyr deacylase from Escherichia coli.

J Soutourina1, P Plateau, F Delort, A Peirotes, S Blanquet.   

Abstract

The yihZ gene of Escherichia coli is shown to produce a deacylase activity capable of recycling misaminoacylated D-Tyr-tRNATyr. The reaction is specific and, under optimal in vitro conditions, proceeds at a rate of 6 s-1 with a Km value for the substrate equal to 1 microM. Cell growth is sensitive to interruption of the yihZ gene if D-tyrosine is added to minimal culture medium. Toxicity of exogenous D-tyrosine is exacerbated if, in addition to the disruption of yihZ, the gene of D-amino acid dehydrogenase (dadA) is also inactivated. Orthologs of the yihZ gene occur in many, but not all, bacteria. In support of the idea of a general role of the D-Tyr-tRNATyr deacylase function in the detoxification of cells, similar genes can be recognized in Saccharomyces cerevisiae, Caenorhabditis elegans, Arabidopsis thaliana, mouse, and man.

Entities:  

Mesh:

Substances:

Year:  1999        PMID: 10383414     DOI: 10.1074/jbc.274.27.19109

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  20 in total

1.  Archaea recruited D-Tyr-tRNATyr deacylase for editing in Thr-tRNA synthetase.

Authors:  Daniel J Rigden
Journal:  RNA       Date:  2004-11-03       Impact factor: 4.942

Review 2.  Bacterial transfer RNAs.

Authors:  Jennifer Shepherd; Michael Ibba
Journal:  FEMS Microbiol Rev       Date:  2015-03-21       Impact factor: 16.408

3.  Transfer RNA-dependent amino acid biosynthesis: an essential route to asparagine formation.

Authors:  Bokkee Min; Joanne T Pelaschier; David E Graham; Debra Tumbula-Hansen; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

4.  Mechanism of tRNA-dependent editing in translational quality control.

Authors:  Jiqiang Ling; Hervé Roy; Michael Ibba
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-21       Impact factor: 11.205

Review 5.  Chiral checkpoints during protein biosynthesis.

Authors:  Santosh Kumar Kuncha; Shobha P Kruparani; Rajan Sankaranarayanan
Journal:  J Biol Chem       Date:  2019-10-07       Impact factor: 5.157

6.  A catalytic mechanism for D-Tyr-tRNATyr deacylase based on the crystal structure of Hemophilus influenzae HI0670.

Authors:  Kap Lim; Aleksandra Tempczyk; Nicklas Bonander; John Toedt; Andrew Howard; Edward Eisenstein; Osnat Herzberg
Journal:  J Biol Chem       Date:  2003-02-04       Impact factor: 5.157

7.  Widespread distribution of cell defense against D-aminoacyl-tRNAs.

Authors:  Sandra Wydau; Guillaume van der Rest; Caroline Aubard; Pierre Plateau; Sylvain Blanquet
Journal:  J Biol Chem       Date:  2009-03-30       Impact factor: 5.157

8.  Conformational and chemical selection by a trans-acting editing domain.

Authors:  Eric M Danhart; Marina Bakhtina; William A Cantara; Alexandra B Kuzmishin; Xiao Ma; Brianne L Sanford; Oscar Vargas-Rodriguez; Marija Košutić; Yuki Goto; Hiroaki Suga; Kotaro Nakanishi; Ronald Micura; Mark P Foster; Karin Musier-Forsyth
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-02       Impact factor: 11.205

9.  Comprehensive identification of essential Staphylococcus aureus genes using Transposon-Mediated Differential Hybridisation (TMDH).

Authors:  Roy R Chaudhuri; Andrew G Allen; Paul J Owen; Gil Shalom; Karl Stone; Marcus Harrison; Timothy A Burgis; Michael Lockyer; Jorge Garcia-Lara; Simon J Foster; Stephen J Pleasance; Sarah E Peters; Duncan J Maskell; Ian G Charles
Journal:  BMC Genomics       Date:  2009-07-01       Impact factor: 3.969

10.  Ligand-bound structures provide atomic snapshots for the catalytic mechanism of D-amino acid deacylase.

Authors:  Tarun Kumar Bhatt; Manickam Yogavel; Sandra Wydau; Ritu Berwal; Amit Sharma
Journal:  J Biol Chem       Date:  2009-12-09       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.