Literature DB >> 10364382

Reappearance of founder virus sequence in human immunodeficiency virus type 1-infected patients.

A C Karlsson1, H Gaines, M Sällberg, S Lindbäck, A Sönnerborg.   

Abstract

Different patterns of temporal evolution in human immunodeficiency virus type 1 V3 and p17 regions are described for eight patients studied during the first years following primary infection. In samples from three patients, a rapid replacement of the major sequence occurred but the original sequence reappeared later simultaneously with clinical deterioration and increased plasma viral load.

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Year:  1999        PMID： 10364382      PMCID： PMC112691     

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  25 in total

1.  HIV-1 genomic RNA diversification following sexual and parenteral virus transmission.

Authors:  T F Wolfs; G Zwart; M Bakker; J Goudsmit
Journal:  Virology       Date:  1992-07       Impact factor: 3.616

2.  Slower evolution of human immunodeficiency virus type 1 quasispecies during progression to AIDS.

Authors:  E L Delwart; H Pan; H W Sheppard; D Wolpert; A U Neumann; B Korber; J I Mullins
Journal:  J Virol       Date:  1997-10       Impact factor: 5.103

3.  General colorimetric method for DNA diagnostics allowing direct solid-phase genomic sequencing of the positive samples.

Authors:  J Wahlberg; J Lundeberg; T Hultman; M Uhlén
Journal:  Proc Natl Acad Sci U S A       Date:  1990-09       Impact factor: 11.205

4.  Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions.

Authors:  M Nei; T Gojobori
Journal:  Mol Biol Evol       Date:  1986-09       Impact factor: 16.240

5.  Effect of immune activation on the dynamics of human immunodeficiency virus replication and on the distribution of viral quasispecies.

Authors:  M A Ostrowski; D C Krakauer; Y Li; S J Justement; G Learn; L A Ehler; S K Stanley; M Nowak; A S Fauci
Journal:  J Virol       Date:  1998-10       Impact factor: 5.103

6.  Nonsynonymous mutations within the human immunodeficiency virus type 1 p17 gene are clustered to sequences binding to the host human leukocyte antigen class I molecules.

Authors:  M Birk; A Vahlne; A Sönnerborg; M Sällberg
Journal:  AIDS Res Hum Retroviruses       Date:  1998-02-10       Impact factor: 2.205

7.  Evolution of sequences encoding the principal neutralization epitope of human immunodeficiency virus 1 is host dependent, rapid, and continuous.

Authors:  T F Wolfs; J J de Jong; H Van den Berg; J M Tijnagel; W J Krone; J Goudsmit
Journal:  Proc Natl Acad Sci U S A       Date:  1990-12       Impact factor: 11.205

8.  Selection for specific sequences in the external envelope protein of human immunodeficiency virus type 1 upon primary infection.

Authors:  L Q Zhang; P MacKenzie; A Cleland; E C Holmes; A J Brown; P Simmonds
Journal:  J Virol       Date:  1993-06       Impact factor: 5.103

9.  Discontinuous sequence change of human immunodeficiency virus (HIV) type 1 env sequences in plasma viral and lymphocyte-associated proviral populations in vivo: implications for models of HIV pathogenesis.

Authors:  P Simmonds; L Q Zhang; F McOmish; P Balfe; C A Ludlam; A J Brown
Journal:  J Virol       Date:  1991-11       Impact factor: 5.103

10.  Genotypic and phenotypic characterization of HIV-1 patients with primary infection.

Authors:  T Zhu; H Mo; N Wang; D S Nam; Y Cao; R A Koup; D D Ho
Journal:  Science       Date:  1993-08-27       Impact factor: 47.728
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  10 in total

1.  Memory in viral quasispecies.

Authors:  C M Ruiz-Jarabo; A Arias; E Baranowski; C Escarmís; E Domingo
Journal:  J Virol       Date:  2000-04       Impact factor: 5.103

Review 2.  Surrogacy in antiviral drug development.

Authors:  Sunil Shaunak; Donald S Davies
Journal:  Br J Clin Pharmacol       Date:  2002-07       Impact factor: 4.335

Review 3.  Viral quasispecies evolution.

Authors:  Esteban Domingo; Julie Sheldon; Celia Perales
Journal:  Microbiol Mol Biol Rev       Date:  2012-06       Impact factor: 11.056

4.  Effect of bottlenecking on evolution of the nonstructural protein 3 gene of hepatitis C virus during sexually transmitted acute resolving infection.

Authors:  Josep Quer; Juan Ignacio Esteban; Joan Cos; Sílvia Sauleda; Laura Ocaña; María Martell; Teresa Otero; Maria Cubero; Eduard Palou; Pedro Murillo; Rafael Esteban; Jaume Guàrdia
Journal:  J Virol       Date:  2005-12       Impact factor: 5.103

5.  Evaluation of sequence ambiguities of the HIV-1 pol gene as a method to identify recent HIV-1 infection in transmitted drug resistance surveys.

Authors:  Emmi Andersson; Wei Shao; Irene Bontell; Fatim Cham; Do Duy Cuong; Amogne Wondwossen; Lynn Morris; Gillian Hunt; Anders Sönnerborg; Silvia Bertagnolio; Frank Maldarelli; Michael R Jordan
Journal:  Infect Genet Evol       Date:  2013-04-11       Impact factor: 3.342

6.  Evolution of human immunodeficiency virus type 1 coreceptor usage during antiretroviral Therapy: a Bayesian approach.

Authors:  Christina M R Kitchen; Sean Philpott; Harold Burger; Barbara Weiser; Kathryn Anastos; Marc A Suchard
Journal:  J Virol       Date:  2004-10       Impact factor: 5.103

7.  Sequential broadening of CTL responses in early HIV-1 infection is associated with viral escape.

Authors:  Annika C Karlsson; Astrid K N Iversen; Joan M Chapman; Tulio de Oliviera; Gerald Spotts; Andrew J McMichael; Miles P Davenport; Frederick M Hecht; Douglas F Nixon
Journal:  PLoS One       Date:  2007-02-21       Impact factor: 3.240

Review 8.  Viruses as quasispecies: biological implications.

Authors:  E Domingo; V Martin; C Perales; A Grande-Pérez; J García-Arriaza; A Arias
Journal:  Curr Top Microbiol Immunol       Date:  2006       Impact factor: 4.291

9.  Kinetics of microbial translocation markers in patients on efavirenz or lopinavir/r based antiretroviral therapy.

Authors:  Jan Vesterbacka; Piotr Nowak; Babilonia Barqasho; Samir Abdurahman; Jessica Nyström; Staffan Nilsson; Hiroyuki Funaoka; Tatsuo Kanda; Lars-Magnus Andersson; Magnus Gisslèn; Anders Sönnerborg
Journal:  PLoS One       Date:  2013-01-28       Impact factor: 3.240

10.  Memory in retroviral quasispecies: experimental evidence and theoretical model for human immunodeficiency virus.

Authors:  Carlos Briones; Esteban Domingo; Carmen Molina-París
Journal:  J Mol Biol       Date:  2003-08-01       Impact factor: 5.469
  10 in total

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