Literature DB >> 10361288

The expression of the trpD, trpC and trpBA genes of Streptomyces coelicolor A3(2) is regulated by growth rate and growth phase but not by feedback repression.

D S Hu1, D W Hood, R Heidstra, D A Hodgson.   

Abstract

Transformation of tryptophan auxotrophs of Streptomyces coelicolor A3(2) and subsequent analysis have allowed the identification of four tryptophan biosynthetic genes. Subcloning, complementation of trp strains, nucleotide sequencing of 5.1 kb and 1.95 kb of DNA and subsequent homology comparisons identified the trpC, trpB and trpA genes and trpD gene respectively. The arrangement of genes in the trpCBA cluster is unusual in that trpC is separated by a small open reading frame, trpX, from the potentially translationally coupled trpB and trpA genes. Sequence analysis of the trpD gene revealed the presence of a large mRNA loop structure directly upstream of the trpD-coding region. S1 nuclease mapping studies of trpCXBA have revealed two major potential transcription start points, one just upstream of the trpC gene and the other located upstream of the trpX gene. S1 nuclease mapping of the trpD region revealed four fragment end-points. Quantitative S1 nuclease protection assays and a promoterless catechol dioxygenase reporter gene have revealed that the expression of all these genes is growth phase dependent and growth rate dependent, expression being maximal during early exponential phase and dropping off sharply in late exponential phase. This growth phase-dependent and growth rate-dependent regulation is the first reported in streptomycete primary metabolism.

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Year:  1999        PMID: 10361288     DOI: 10.1046/j.1365-2958.1999.01407.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  11 in total

1.  Regulation of an auxiliary, antibiotic-resistant tryptophanyl-tRNA synthetase gene via ribosome-mediated transcriptional attenuation.

Authors:  James J Vecchione; Jason K Sello
Journal:  J Bacteriol       Date:  2010-05-07       Impact factor: 3.490

2.  Co-occurrence of analogous enzymes determines evolution of a novel (βα)8-isomerase sub-family after non-conserved mutations in flexible loop.

Authors:  Ernesto A Verduzco-Castro; Karolina Michalska; Michael Endres; Ana L Juárez-Vazquez; Lianet Noda-García; Changsoo Chang; Christopher S Henry; Gyorgy Babnigg; Andrzej Joachimiak; Francisco Barona-Gómez
Journal:  Biochem J       Date:  2016-02-29       Impact factor: 3.857

3.  Regulation of the Streptomyces coelicolor calcium-dependent antibiotic by absA, encoding a cluster-linked two-component system.

Authors:  N Jamie Ryding; Todd B Anderson; Wendy C Champness
Journal:  J Bacteriol       Date:  2002-02       Impact factor: 3.490

4.  Genome-scale analysis of Streptomyces coelicolor A3(2) metabolism.

Authors:  Irina Borodina; Preben Krabben; Jens Nielsen
Journal:  Genome Res       Date:  2005-06       Impact factor: 9.043

5.  Starvation survival response of Mycobacterium tuberculosis.

Authors:  Tanya Parish
Journal:  J Bacteriol       Date:  2003-11       Impact factor: 3.490

6.  Occurrence of a putative ancient-like isomerase involved in histidine and tryptophan biosynthesis.

Authors:  Francisco Barona-Gómez; David A Hodgson
Journal:  EMBO Rep       Date:  2003-03       Impact factor: 8.807

7.  Transcriptome dynamics-based operon prediction and verification in Streptomyces coelicolor.

Authors:  Salim Charaniya; Sarika Mehra; Wei Lian; Karthik P Jayapal; George Karypis; Wei-Shou Hu
Journal:  Nucleic Acids Res       Date:  2007-10-24       Impact factor: 16.971

8.  Inter-genomic displacement via lateral gene transfer of bacterial trp operons in an overall context of vertical genealogy.

Authors:  Gary Xie; Carol A Bonner; Jian Song; Nemat O Keyhani; Roy A Jensen
Journal:  BMC Biol       Date:  2004-06-23       Impact factor: 7.431

9.  TrpM, a Small Protein Modulating Tryptophan Biosynthesis and Morpho-Physiological Differentiation in Streptomyces coelicolor A3(2).

Authors:  Emilia Palazzotto; Giuseppe Gallo; Giovanni Renzone; Anna Giardina; Alberto Sutera; Joohee Silva; Celinè Vocat; Luigi Botta; Andrea Scaloni; Anna Maria Puglia
Journal:  PLoS One       Date:  2016-09-26       Impact factor: 3.240

10.  The Streptomyces coelicolor Small ORF trpM Stimulates Growth and Morphological Development and Exerts Opposite Effects on Actinorhodin and Calcium-Dependent Antibiotic Production.

Authors:  Alberto Vassallo; Emilia Palazzotto; Giovanni Renzone; Luigi Botta; Teresa Faddetta; Andrea Scaloni; Anna Maria Puglia; Giuseppe Gallo
Journal:  Front Microbiol       Date:  2020-02-19       Impact factor: 5.640

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