Literature DB >> 10361088

Oligonucleotide aptamers that recognize small molecules.

M Famulok1.   

Abstract

Nucleic acid receptors ('aptamers'), which recognize a large variety of organic molecules of low molecular weight, have been isolated from combinatorial nucleic acid libraries by in vitro selection methods. Structural studies of nucleic acid-small molecule complexes provide insight into both the principles of molecular recognition by this class of biopolymers and the architecture of tertiary motifs in nucleic acid folding. Aptamers that recognize small molecules are increasingly applied as tools in molecular biology, from the detection of oxidative damage in DNA to conditional gene expression and from their use as modules for the engineering of allosteric ribozymes to biosensors.

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Year:  1999        PMID: 10361088     DOI: 10.1016/S0959-440X(99)80043-8

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  35 in total

1.  Do mRNAs act as direct sensors of small molecules to control their expression?

Authors:  G D Stormo; Y Ji
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-14       Impact factor: 11.205

2.  Evolution of aptamers with a new specificity and new secondary structures from an ATP aptamer.

Authors:  Zhen Huang; Jack W Szostak
Journal:  RNA       Date:  2003-12       Impact factor: 4.942

3.  Isolation of high-affinity GTP aptamers from partially structured RNA libraries.

Authors:  Jonathan H Davis; Jack W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-16       Impact factor: 11.205

4.  Selection and evolution of NTP-specific aptamers.

Authors:  Laure Weill; Dominique Louis; Bruno Sargueil
Journal:  Nucleic Acids Res       Date:  2004-09-27       Impact factor: 16.971

5.  Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae.

Authors:  Jan Lipfert; Rhiju Das; Vincent B Chu; Madhuri Kudaravalli; Nathan Boyd; Daniel Herschlag; Sebastian Doniach
Journal:  J Mol Biol       Date:  2006-10-13       Impact factor: 5.469

6.  Aptamers recognizing glycosylated hemagglutinin expressed on the surface of vaccinia virus-infected cells.

Authors:  Parag Parekh; Zhiwen Tang; Peter C Turner; Richard W Moyer; Weihong Tan
Journal:  Anal Chem       Date:  2010-10-15       Impact factor: 6.986

7.  Ligand-induced conformational capture of a synthetic tetracycline riboswitch revealed by pulse EPR.

Authors:  Dorith Wunnicke; Denise Strohbach; Julia E Weigand; Bettina Appel; Emiliano Feresin; Beatrix Suess; Sabine Müller; Heinz-Jürgen Steinhoff
Journal:  RNA       Date:  2010-11-19       Impact factor: 4.942

8.  Aptamer selection express: a novel method for rapid single-step selection and sensing of aptamers.

Authors:  Maomian Fan; Shelly Roper McBurnett; Carrie J Andrews; Amity M Allman; John G Bruno; Johnathan L Kiel
Journal:  J Biomol Tech       Date:  2008-12

9.  Isolating single stranded DNA using a microfluidic dialysis device.

Authors:  Yixiao Sheng; Michael T Bowser
Journal:  Analyst       Date:  2013-11-08       Impact factor: 4.616

10.  Label-free fluorescent aptamer sensor based on regulation of malachite green fluorescence.

Authors:  Weichen Xu; Yi Lu
Journal:  Anal Chem       Date:  2010-01-15       Impact factor: 6.986

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