Literature DB >> 10339549

DNA methylation is a reversible biological signal.

S Ramchandani1, S K Bhattacharya, N Cervoni, M Szyf.   

Abstract

The pattern of DNA methylation plays an important role in regulating different genome functions. To test the hypothesis that DNA methylation is a reversible biochemical process, we purified a DNA demethylase from human cells that catalyzes the cleavage of a methyl residue from 5-methyl cytosine and its release as methanol. We show that similar to DNA methyltransferase, DNA demethylase shows CpG dinucleotide specificity, can demethylate mdCpdG sites in different sequence contexts, and demethylates both fully methylated and hemimethylated DNA. Thus, contrary to the commonly accepted model, DNA methylation is a reversible signal, similar to other physiological biochemical modifications.

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Year:  1999        PMID: 10339549      PMCID: PMC26843          DOI: 10.1073/pnas.96.11.6107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  A DNA signal from the Thy-1 gene defines de novo methylation patterns in embryonic stem cells.

Authors:  M Szyf; G Tanigawa; P L McCarthy
Journal:  Mol Cell Biol       Date:  1990-08       Impact factor: 4.272

2.  Cloning and sequencing of a cDNA encoding DNA methyltransferase of mouse cells. The carboxyl-terminal domain of the mammalian enzymes is related to bacterial restriction methyltransferases.

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Journal:  J Mol Biol       Date:  1988-10-20       Impact factor: 5.469

Review 3.  DNA methylation and gene function.

Authors:  A Razin; A D Riggs
Journal:  Science       Date:  1980-11-07       Impact factor: 47.728

Review 4.  DNA methylation patterns. Formation and function.

Authors:  A Razin; M Szyf
Journal:  Biochim Biophys Acta       Date:  1984-09-10

5.  Substrate and sequence specificity of a eukaryotic DNA methylase.

Authors:  Y Gruenbaum; H Cedar; A Razin
Journal:  Nature       Date:  1982-02-18       Impact factor: 49.962

6.  Regulated expression of muscle-specific genes introduced into mouse embryonal stem cells: inverse correlation with DNA methylation.

Authors:  D Shinar; O Yoffe; M Shani; D Yaffe
Journal:  Differentiation       Date:  1989-08       Impact factor: 3.880

7.  Catalytic subunit of human DNA polymerase alpha overproduced from baculovirus-infected insect cells. Structural and enzymological characterization.

Authors:  W C Copeland; T S Wang
Journal:  J Biol Chem       Date:  1991-11-25       Impact factor: 5.157

8.  Reactivation of an inactive human X chromosome: evidence for X inactivation by DNA methylation.

Authors:  T Mohandas; R S Sparkes; L J Shapiro
Journal:  Science       Date:  1981-01-23       Impact factor: 47.728

9.  Replacement of 5-methylcytosine by cytosine: a possible mechanism for transient DNA demethylation during differentiation.

Authors:  A Razin; M Szyf; T Kafri; M Roll; H Giloh; S Scarpa; D Carotti; G L Cantoni
Journal:  Proc Natl Acad Sci U S A       Date:  1986-05       Impact factor: 11.205

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Authors:  M Monk; M Boubelik; S Lehnert
Journal:  Development       Date:  1987-03       Impact factor: 6.868

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  83 in total

1.  Lsh, a member of the SNF2 family, is required for genome-wide methylation.

Authors:  K Dennis; T Fan; T Geiman; Q Yan; K Muegge
Journal:  Genes Dev       Date:  2001-11-15       Impact factor: 11.361

Review 2.  DNA demethylation.

Authors:  A P Wolffe; P L Jones; P A Wade
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

Review 3.  The effect of stress on genome regulation and structure.

Authors:  Andreas Madlung; Luca Comai
Journal:  Ann Bot       Date:  2004-08-19       Impact factor: 4.357

4.  Neuronal injury: folate to the rescue?

Authors:  Golo Kronenberg; Matthias Endres
Journal:  J Clin Invest       Date:  2010-04-26       Impact factor: 14.808

Review 5.  Chromatin, DNA methylation and neuron gene regulation--the purpose of the package.

Authors:  Rajiv P Sharma; Dennis R Grayson; Alessandro Guidotti; Erminio Costa
Journal:  J Psychiatry Neurosci       Date:  2005-07       Impact factor: 6.186

Review 6.  Epigenetic mechanisms in anti-cancer actions of bioactive food components--the implications in cancer prevention.

Authors:  B Stefanska; H Karlic; F Varga; K Fabianowska-Majewska; Ag Haslberger
Journal:  Br J Pharmacol       Date:  2012-09       Impact factor: 8.739

7.  Epigenetic programming of the rRNA promoter by MBD3.

Authors:  Shelley E Brown; Moshe Szyf
Journal:  Mol Cell Biol       Date:  2007-04-23       Impact factor: 4.272

8.  Inferring and modeling inheritance of differentially methylated changes across multiple generations.

Authors:  Pascal Belleau; Astrid Deschênes; Marie-Pier Scott-Boyer; Romain Lambrot; Mathieu Dalvai; Sarah Kimmins; Janice Bailey; Arnaud Droit
Journal:  Nucleic Acids Res       Date:  2018-08-21       Impact factor: 16.971

9.  Characterization of two rice DNA methyltransferase genes and RNAi-mediated reactivation of a silenced transgene in rice callus.

Authors:  Prapapan Teerawanichpan; Mahesh B Chandrasekharan; Yiming Jiang; Jarunya Narangajavana; Timothy C Hall
Journal:  Planta       Date:  2003-09-25       Impact factor: 4.116

10.  Combined Inhibition of DNMT and HDAC Blocks the Tumorigenicity of Cancer Stem-like Cells and Attenuates Mammary Tumor Growth.

Authors:  Rajneesh Pathania; Sabarish Ramachandran; Gurusamy Mariappan; Priyanka Thakur; Huidong Shi; Jeong-Hyeon Choi; Santhakumar Manicassamy; Ravindra Kolhe; Puttur D Prasad; Suash Sharma; Bal L Lokeshwar; Vadivel Ganapathy; Muthusamy Thangaraju
Journal:  Cancer Res       Date:  2016-04-05       Impact factor: 12.701

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