Literature DB >> 10320572

The C-terminus of eRF1 defines a functionally important domain for translation termination in Saccharomyces cerevisiae.

L Eurwilaichitr1, F M Graves, I Stansfield, M F Tuite.   

Abstract

Translation termination in eukaryotes is mediated by two release factors, eRF1 and eRF3, which interact to form a heterodimer that mediates termination at all three stop codons. By C-terminal deletion analysis of eRF1 from the yeast Saccharomyces cerevisiae, we show that the extreme C-terminus of this 437-amino-acid protein defines a functionally important domain for translation termination. A strain encoding eRF1 lacking the C-terminal 32 amino acids is not viable, whereas deletion of the C-terminal 19 amino acids is viable but shows a termination defect in vivo causing an enhancement of nonsense suppression. Using a combination of two-hybrid analysis and in vitro binding studies, we demonstrate that deletions encompassing the C-terminus of eRF1 cause a significant reduction in eRF3 binding to eRF1. All of the C-terminally truncated eRF1 still bind the ribosome, suggesting that the C-terminus does not constitute a ribosome-binding domain and eRF1 does not need to form a stable complex with eRF3 in order to bind the ribosome. These data, together with previously published data, suggest that the region between amino acids 411 and 418 of yeast eRF1 defines an essential functional domain that is part of the major site of interaction with eRF3. However, a stable eRF1:eRF3 complex does not have to be formed to maintain viability or efficient translation termination. Alignment of the seven known eukaryotic eRF1 sequences indicates that a highly conserved motif, GFGGIGG/A is present within the region of the C-terminus, although our deletion studies suggest that it is sequences C-terminal to this region that are functionally important.

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Year:  1999        PMID: 10320572     DOI: 10.1046/j.1365-2958.1999.01346.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  37 in total

1.  Translation termination in eukaryotes: polypeptide release factor eRF1 is composed of functionally and structurally distinct domains.

Authors:  L Y Frolova; T I Merkulova; L L Kisselev
Journal:  RNA       Date:  2000-03       Impact factor: 4.942

2.  Dependence and independence of [PSI(+)] and [PIN(+)]: a two-prion system in yeast?

Authors:  I L Derkatch; M E Bradley; S V Masse; S P Zadorsky; G V Polozkov; S G Inge-Vechtomov; S W Liebman
Journal:  EMBO J       Date:  2000-05-02       Impact factor: 11.598

3.  Terminating eukaryote translation: domain 1 of release factor eRF1 functions in stop codon recognition.

Authors:  G Bertram; H A Bell; D W Ritchie; G Fullerton; I Stansfield
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

4.  Stop codon selection in eukaryotic translation termination: comparison of the discriminating potential between human and ciliate eRF1s.

Authors:  Laurent Chavatte; Stéphanie Kervestin; Alain Favre; Olivier Jean-Jean
Journal:  EMBO J       Date:  2003-04-01       Impact factor: 11.598

5.  Mtt1 is a Upf1-like helicase that interacts with the translation termination factors and whose overexpression can modulate termination efficiency.

Authors:  K Czaplinski; N Majlesi; T Banerjee; S W Peltz
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

6.  GTP hydrolysis by eRF3 facilitates stop codon decoding during eukaryotic translation termination.

Authors:  Joe Salas-Marco; David M Bedwell
Journal:  Mol Cell Biol       Date:  2004-09       Impact factor: 4.272

7.  Three distinct peptides from the N domain of translation termination factor eRF1 surround stop codon in the ribosome.

Authors:  Konstantin N Bulygin; Yulia S Khairulina; Petr M Kolosov; Aliya G Ven'yaminova; Dmitri M Graifer; Yuri N Vorobjev; Ludmila Yu Frolova; Lev L Kisselev; Galina G Karpova
Journal:  RNA       Date:  2010-08-05       Impact factor: 4.942

8.  Analysis of Dom34 and its function in no-go decay.

Authors:  Dario O Passos; Meenakshi K Doma; Christopher J Shoemaker; Denise Muhlrad; Rachel Green; Jonathan Weissman; Julie Hollien; Roy Parker
Journal:  Mol Biol Cell       Date:  2009-05-06       Impact factor: 4.138

9.  Structural insights into eRF3 and stop codon recognition by eRF1.

Authors:  Zhihong Cheng; Kazuki Saito; Andrey V Pisarev; Miki Wada; Vera P Pisareva; Tatyana V Pestova; Michal Gajda; Adam Round; Chunguang Kong; Mengkiat Lim; Yoshikazu Nakamura; Dmitri I Svergun; Koichi Ito; Haiwei Song
Journal:  Genes Dev       Date:  2009-05-01       Impact factor: 11.361

10.  Distinct eRF3 requirements suggest alternate eRF1 conformations mediate peptide release during eukaryotic translation termination.

Authors:  Hua Fan-Minogue; Ming Du; Andrey V Pisarev; Adam K Kallmeyer; Joe Salas-Marco; Kim M Keeling; Sunnie R Thompson; Tatyana V Pestova; David M Bedwell
Journal:  Mol Cell       Date:  2008-06-06       Impact factor: 17.970

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