Literature DB >> 10204200

Combining classification trees using MLE.

W D Shannon1, D Banks.   

Abstract

We propose a probability distribution for an equivalence class of classification trees (that is, those that ignore the value of the cutpoints but retain tree structure). This distribution is parameterized by a central tree structure representing the true model, and a precision or concentration coefficient representing the variability around the central tree. We use this distribution to model an observed set of classification trees exhibiting variability in tree structure. We propose the maximum likelihood estimate of the central tree as the best tree to represent the set. This MLE retains the interpretability of a single tree model and has excellent generalizability. We implement an ascent search for the MLE tree structure using a data set of 13 classification trees that predict the presence or absence of cancer based on immune system parameters.

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Mesh:

Year:  1999        PMID: 10204200     DOI: 10.1002/(sici)1097-0258(19990330)18:6<727::aid-sim61>3.0.co;2-2

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  5 in total

1.  Regression tree construction by bootstrap: model search for DRG-systems applied to Austrian health-data.

Authors:  Thomas Grubinger; Conrad Kobel; Karl-Peter Pfeiffer
Journal:  BMC Med Inform Decis Mak       Date:  2010-02-03       Impact factor: 2.796

2.  Logic Learning Machine creates explicit and stable rules stratifying neuroblastoma patients.

Authors:  Davide Cangelosi; Fabiola Blengio; Rogier Versteeg; Angelika Eggert; Alberto Garaventa; Claudio Gambini; Massimo Conte; Alessandra Eva; Marco Muselli; Luigi Varesio
Journal:  BMC Bioinformatics       Date:  2013-04-22       Impact factor: 3.169

3.  Detecting associations between intact connectomes and clinical covariates using recursive partitioning object-oriented data analysis.

Authors:  Dake Yang; Elena Deych; Berkley Shands; Meghan C Campbell; Joel S Perlmutter; Steve Petersen; Bradley L Schlaggar; William Shannon
Journal:  Stat Med       Date:  2019-10-25       Impact factor: 2.373

4.  Measuring the impact of apnea and obesity on circadian activity patterns using functional linear modeling of actigraphy data.

Authors:  Jia Wang; Hong Xian; Amy Licis; Elena Deych; Jimin Ding; Jennifer McLeland; Cristina Toedebusch; Tao Li; Stephen Duntley; William Shannon
Journal:  J Circadian Rhythms       Date:  2011-10-13

5.  Statistical object data analysis of taxonomic trees from human microbiome data.

Authors:  Patricio S La Rosa; Berkley Shands; Elena Deych; Yanjiao Zhou; Erica Sodergren; George Weinstock; William D Shannon
Journal:  PLoS One       Date:  2012-11-09       Impact factor: 3.240

  5 in total

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