Literature DB >> 10080886

The structure and function of the 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase from Haemophilus influenzae.

M Hennig1, G E Dale, A D'arcy, F Danel, S Fischer, C P Gray, S Jolidon, F Müller, M G Page, P Pattison, C Oefner.   

Abstract

The gene encoding the 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase of Haemophilus influenzae has been cloned and expressed in Escherichia coli. A complex of the purified protein with a substrate analog has been crystallized and its structure solved by multiple anomalous dispersion using phase information obtained from a single crystal of selenomethione-labeled protein. The enzyme folds into a four-stranded antiparallel beta-sheet flanked on one side by two alpha-helices and on the other by three consecutive alpha-helices, giving a novel beta1alpha1beta2beta3alpha2beta4alpha3alpha4alpha5 polypeptide topology. The three-dimensional structure of a binary complex has been refined at 2.1 A resolution. The location of the substrate analog and a sulfate ion gives important insight into the molecular mechanism of the enzyme. Copyright 1999 Academic Press.

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Year:  1999        PMID: 10080886     DOI: 10.1006/jmbi.1999.2623

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  15 in total

1.  Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties.

Authors:  Genbin Shi; Gary Shaw; Yu-He Liang; Priadarsini Subburaman; Yue Li; Yan Wu; Honggao Yan; Xinhua Ji
Journal:  Bioorg Med Chem       Date:  2011-11-23       Impact factor: 3.641

2.  Bisubstrate analog inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: new lead exhibits a distinct binding mode.

Authors:  Genbin Shi; Gary Shaw; Yue Li; Yan Wu; Honggao Yan; Xinhua Ji
Journal:  Bioorg Med Chem       Date:  2012-06-06       Impact factor: 3.641

3.  Crystallization and preliminary X-ray analysis of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase from Staphylococcus aureus.

Authors:  Sandeep Chhabra; Janet Newman; Thomas S Peat; Ross T Fernley; Joanne Caine; Jamie S Simpson; James D Swarbrick
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-04-30

4.  The identification, analysis and structure-based development of novel inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase.

Authors:  Mi-Kyung Yun; Daniel Hoagland; Gyanendra Kumar; M Brett Waddell; Charles O Rock; Richard E Lee; Stephen W White
Journal:  Bioorg Med Chem       Date:  2014-02-25       Impact factor: 3.641

5.  New ways to derivatize at position 6 of 7,7-dimethyl-7,8-dihydropterin.

Authors:  Genbin Shi; Xinhua Ji
Journal:  Tetrahedron Lett       Date:  2011-11-16       Impact factor: 2.415

6.  Loop conformation and dynamics of the Escherichia coli HPPK apo-enzyme and its binary complex with MgATP.

Authors:  Rong Yang; Matthew C Lee; Honggao Yan; Yong Duan
Journal:  Biophys J       Date:  2005-04-08       Impact factor: 4.033

Review 7.  Phosphoribosyl Diphosphate (PRPP): Biosynthesis, Enzymology, Utilization, and Metabolic Significance.

Authors:  Bjarne Hove-Jensen; Kasper R Andersen; Mogens Kilstrup; Jan Martinussen; Robert L Switzer; Martin Willemoës
Journal:  Microbiol Mol Biol Rev       Date:  2016-12-28       Impact factor: 11.056

8.  Crystal structure of the 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase•dihydropteroate synthase bifunctional enzyme from Francisella tularensis.

Authors:  Charles W Pemble; Perdeep K Mehta; Smriti Mehra; Zhenmei Li; Amanda Nourse; Richard E Lee; Stephen W White
Journal:  PLoS One       Date:  2010-11-30       Impact factor: 3.240

9.  Kinetic and structural characterization of a product complex of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase from Escherichia coli.

Authors:  Arnaud Garçon; Alun Bermingham; Lu-Yun Lian; Jeremy P Derrick
Journal:  Biochem J       Date:  2004-06-15       Impact factor: 3.857

10.  Structural enzymology and inhibition of the bi-functional folate pathway enzyme HPPK-DHPS from the biowarfare agent Francisella tularensis.

Authors:  Gary X Shaw; Yue Li; Genbin Shi; Yan Wu; Scott Cherry; Danielle Needle; Di Zhang; Joseph E Tropea; David S Waugh; Honggao Yan; Xinhua Ji
Journal:  FEBS J       Date:  2014-07-23       Impact factor: 5.542

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