Literature DB >> 10080185

High-resolution mapping of quantitative trait loci in outbred mice.

C J Talbot1, A Nicod, S S Cherny, D W Fulker, A C Collins, J Flint.   

Abstract

Screening the whole genome of a cross between two inbred animal strains has proved to be a powerful method for detecting genetic loci underlying quantitative behavioural traits, but the level of resolution offered by quantitative trait loci (QTL) mapping is still too coarse to permit molecular cloning of the genetic determinants. To achieve high-resolution mapping, we used an outbred stock of mice for which the entire genealogy is known. The heterogeneous stock (HS) was established 30 years ago from an eight-way cross of C57BL/6, BALB/c, RIII, AKR, DBA/2, I, A/J and C3H inbred mouse strains. At the time of the experiment reported here, the HS mice were at generation 58, theoretically offering at least a 30-fold increase in resolution for QTL mapping compared with a backcross or an F2 intercross. Using the HS mice we have mapped a QTL influencing a psychological trait in mice to a 0.8-cM interval on chromosome 1. This method allows simultaneous fine mapping of multiple QTLs, as shown by our report of a second QTL on chromosome 12. The high resolution possible with this approach makes QTLs accessible to positional cloning.

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Year:  1999        PMID: 10080185     DOI: 10.1038/6825

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  72 in total

1.  A method for fine mapping quantitative trait loci in outbred animal stocks.

Authors:  R Mott; C J Talbot; M G Turri; A C Collins; J Flint
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

2.  Mapping of quantitative trait loci with knockout/congenic strains.

Authors:  V J Bolivar; M N Cook; L Flaherty
Journal:  Genome Res       Date:  2001-09       Impact factor: 9.043

3.  Linkage analysis of extremely discordant and concordant sibling pairs identifies quantitative-trait loci that influence variation in the human personality trait neuroticism.

Authors:  Jan Fullerton; Matthew Cubin; Hemant Tiwari; Chenxi Wang; Amarjit Bomhra; Stuart Davidson; Sue Miller; Christopher Fairburn; Guy Goodwin; Michael C Neale; Simon Fiddy; Richard Mott; David B Allison; Jonathan Flint
Journal:  Am J Hum Genet       Date:  2003-02-20       Impact factor: 11.025

Review 4.  The nature and identification of quantitative trait loci: a community's view.

Authors:  Oduola Abiola; Joe M Angel; Philip Avner; Alexander A Bachmanov; John K Belknap; Beth Bennett; Elizabeth P Blankenhorn; David A Blizard; Valerie Bolivar; Gundrun A Brockmann; Kari J Buck; Jean-Francoise Bureau; William L Casley; Elissa J Chesler; James M Cheverud; Gary A Churchill; Melloni Cook; John C Crabbe; Wim E Crusio; Ariel Darvasi; Gerald de Haan; Peter Dermant; R W Doerge; Rosemary W Elliot; Charles R Farber; Lorraine Flaherty; Jonathan Flint; Howard Gershenfeld; John P Gibson; Jing Gu; Weikuan Gu; Heinz Himmelbauer; Robert Hitzemann; Hui-Chen Hsu; Kent Hunter; Fuad F Iraqi; Ritsert C Jansen; Thomas E Johnson; Byron C Jones; Gerd Kempermann; Frank Lammert; Lu Lu; Kenneth F Manly; Douglas B Matthews; Juan F Medrano; Margarete Mehrabian; Guy Mittlemann; Beverly A Mock; Jeffrey S Mogil; Xavier Montagutelli; Grant Morahan; John D Mountz; Hiroki Nagase; Richard S Nowakowski; Bruce F O'Hara; Alexander V Osadchuk; Beverly Paigen; Abraham A Palmer; Jeremy L Peirce; Daniel Pomp; Michael Rosemann; Glenn D Rosen; Leonard C Schalkwyk; Ze'ev Seltzer; Stephen Settle; Kazuhiro Shimomura; Siming Shou; James M Sikela; Linda D Siracusa; Jimmy L Spearow; Cory Teuscher; David W Threadgill; Linda A Toth; Ayo A Toye; Csaba Vadasz; Gary Van Zant; Edward Wakeland; Robert W Williams; Huang-Ge Zhang; Fei Zou
Journal:  Nat Rev Genet       Date:  2003-11       Impact factor: 53.242

5.  A strategy for the integration of QTL, gene expression, and sequence analyses.

Authors:  Robert Hitzemann; Barry Malmanger; Cheryl Reed; Maureen Lawler; Barbara Hitzemann; Shannon Coulombe; Kari Buck; Brooks Rademacher; Nicole Walter; Yekatrina Polyakov; James Sikela; Brenda Gensler; Sonya Burgers; Robert W Williams; Ken Manly; Jonathan Flint; Christopher Talbot
Journal:  Mamm Genome       Date:  2003-11       Impact factor: 2.957

6.  Chromosome substitution strains: some quantitative considerations for genome scans and fine mapping.

Authors:  John K Belknap
Journal:  Mamm Genome       Date:  2003-11       Impact factor: 2.957

7.  QTL fine-mapping with recombinant-inbred heterogeneous stocks and in vitro heterogeneous stocks.

Authors:  William S J Valdar; Jonathan Flint; Richard Mott
Journal:  Mamm Genome       Date:  2003-12       Impact factor: 2.957

8.  Using advanced intercross lines for high-resolution mapping of HDL cholesterol quantitative trait loci.

Authors:  Xiaosong Wang; Isabelle Le Roy; Edwige Nicodeme; Renhua Li; Richard Wagner; Christina Petros; Gary A Churchill; Stephen Harris; Ariel Darvasi; Jorge Kirilovsky; Pierre L Roubertoux; Beverly Paigen
Journal:  Genome Res       Date:  2003-06-12       Impact factor: 9.043

9.  Integration and modularity of quantitative trait locus effects on geometric shape in the mouse mandible.

Authors:  Christian Peter Klingenberg; Larry J Leamy; James M Cheverud
Journal:  Genetics       Date:  2004-04       Impact factor: 4.562

10.  Getting biological about the genetics of diabetes.

Authors:  Christopher B Newgard; Alan D Attie
Journal:  Nat Med       Date:  2010-04       Impact factor: 53.440

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