Literature DB >> 10079367

Role of a 461-bp G-rich repetitive element in H19 transgene imprinting.

M P Stadnick1, F M Pieracci, M J Cranston, E Taksel, J L Thorvaldsen, M S Bartolomei.   

Abstract

The molecular mechanism leading to the imprinted expression of genes is poorly understood. While no conserved cis-acting elements have been identified within the known loci, many imprinted genes are located near directly repetitive sequence elements, suggesting that such repeats might play a role in imprinted gene expression. The maternally expressed mouse H19 gene is located approximately 1.5 kb downstream from a 461-bp G-rich repetitive element. We have used a transgenic model to investigate whether this element is essential for H19 imprinting. Previous results demonstrated that a transgene, which contains 14 kb of H19 sequence, exhibits parent-of-origin specific expression and methylation analogous to the endogenous H19 imprinting pattern. Here, we have generated transgenes lacking the G-rich repeat. One transgene, containing a deletion of the G-rich repetitive element but which includes an additional 1.7 kb of 5' H19 sequence, is imprinted similarly to the endogenous H19 gene. To determine whether the G-rich repeat is conserved in other imprinted mammalian H19 homologues, additional 5' flanking sequences were cloned from the rat and human. This element is conserved in the rat but not in human DNA. These results suggest that the 461-bp G-rich repetitive element is not essential for H19 imprinting.

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Year:  1999        PMID: 10079367     DOI: 10.1007/s004270050248

Source DB:  PubMed          Journal:  Dev Genes Evol        ISSN: 0949-944X            Impact factor:   0.900


  15 in total

1.  Non-coding, mRNA-like RNAs database Y2K.

Authors:  V A Erdmann; M Szymanski; A Hochberg; N Groot; J Barciszewski
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Regulation of DNA methylation of Rasgrf1.

Authors:  Bong June Yoon; Herry Herman; Aimee Sikora; Laura T Smith; Christoph Plass; Paul D Soloway
Journal:  Nat Genet       Date:  2001-12-20       Impact factor: 38.330

3.  Role of CTCF binding sites in the Igf2/H19 imprinting control region.

Authors:  Piroska E Szabó; Shih-Huey E Tang; Francisco J Silva; Walter M K Tsark; Jeffrey R Mann
Journal:  Mol Cell Biol       Date:  2004-06       Impact factor: 4.272

4.  Investigation of elements sufficient to imprint the mouse Air promoter.

Authors:  F Sleutels; D P Barlow
Journal:  Mol Cell Biol       Date:  2001-08       Impact factor: 4.272

5.  Short interspersed transposable elements (SINEs) are excluded from imprinted regions in the human genome.

Authors:  John M Greally
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-26       Impact factor: 11.205

6.  Novel cis-regulatory function in ICR-mediated imprinted repression of H19.

Authors:  Folami Y Ideraabdullah; Lara K Abramowitz; Joanne L Thorvaldsen; Christopher Krapp; Sherry C Wen; Nora Engel; Marisa S Bartolomei
Journal:  Dev Biol       Date:  2011-05-10       Impact factor: 3.582

7.  Analysis of sequence upstream of the endogenous H19 gene reveals elements both essential and dispensable for imprinting.

Authors:  Joanne L Thorvaldsen; Mellissa R W Mann; Okechukwu Nwoko; Kristen L Duran; Marisa S Bartolomei
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

8.  Comparative genomic sequencing identifies novel tissue-specific enhancers and sequence elements for methylation-sensitive factors implicated in Igf2/H19 imprinting.

Authors:  K Ishihara; N Hatano; H Furuumi; R Kato; T Iwaki; K Miura; Y Jinno; H Sasaki
Journal:  Genome Res       Date:  2000-05       Impact factor: 9.043

9.  Humanized H19/Igf2 locus reveals diverged imprinting mechanism between mouse and human and reflects Silver-Russell syndrome phenotypes.

Authors:  Stella K Hur; Andrea Freschi; Folami Ideraabdullah; Joanne L Thorvaldsen; Lacey J Luense; Angela H Weller; Shelley L Berger; Flavia Cerrato; Andrea Riccio; Marisa S Bartolomei
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-12       Impact factor: 11.205

10.  Tissue-specific insulator function at H19/Igf2 revealed by deletions at the imprinting control region.

Authors:  Folami Y Ideraabdullah; Joanne L Thorvaldsen; Jennifer A Myers; Marisa S Bartolomei
Journal:  Hum Mol Genet       Date:  2014-07-02       Impact factor: 6.150

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