Literature DB >> 10074338

Modification of near active site residues in organophosphorus hydrolase reduces metal stoichiometry and alters substrate specificity.

B diSioudi1, J K Grimsley, K Lai, J R Wild.   

Abstract

Organophosphorus hydrolase (OPH, EC 8.1.3.1) is a dimeric, bacterial enzyme that detoxifies many organophosphorus neurotoxins by hydrolyzing a variety of phosphonate bonds. The histidinyl residues at amino acid positions 254 and 257 are located near the bimetallic active site present in each monomer. It has been proposed that these residues influence catalysis by interacting with active site residues and the substrate in the binding pocket. We replaced the histidine at position 254 with arginine (H254R) and the one at position 257 with leucine (H257L) independently to form the single-site-modified enzymes. The double modification was also constructed to incorporate both changes (H254R/H257L). Although native OPH has two metals at each active site (four per dimer), all three of these altered enzymes possessed only two metals per dimer while retaining considerable enzymatic activity for the preferred phosphotriester (P-O bond) substrate, paraoxon (5-100% kcat). The three altered enzymes achieved a 2-30-fold increase in substrate specificity (kcat/Km) for demeton S (P-S bond), an analogue for the chemical warfare agent VX. In contrast, the substrate specificity for diisopropyl fluorophosphonate (P-F bond) was substantially decreased for each of these enzymes. In addition, H257L and H254R/H257L showed an 11- and 18-fold increase, respectively, in specificity for NPPMP, the analogue for the chemical warfare agent soman. These results demonstrate the ability to significantly enhance the specificity of OPH for various substrates by site-specific modifications, and it is suggested that changes in metal requirements may affect these improved catalytic characteristics by enhancing structural flexibility and improving access of larger substrates to the active site, while simultaneously decreasing the catalytic efficiency for smaller substrates.

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Year:  1999        PMID: 10074338     DOI: 10.1021/bi9825302

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

1.  Improving the specificity of organophosphorus hydrolase to acephate by mutagenesis at its binding site: a computational study.

Authors:  Reza Badakhshan; Mozafar Mohammadi; Gholamreza Farnoosh
Journal:  J Mol Model       Date:  2021-05-10       Impact factor: 1.810

2.  Enzymatic detoxification of organophosphorus pesticides and related toxicants.

Authors:  Karla Alejo-González; Erik Hanson-Viana; Rafael Vazquez-Duhalt
Journal:  J Pestic Sci       Date:  2018-02-28       Impact factor: 1.519

3.  Conformational variability of organophosphorus hydrolase upon soman and paraoxon binding.

Authors:  Diego E B Gomes; Roberto D Lins; Pedro G Pascutti; Chenghong Lei; Thereza A Soares
Journal:  J Phys Chem B       Date:  2011-12-05       Impact factor: 2.991

4.  Conformational sampling, catalysis, and evolution of the bacterial phosphotriesterase.

Authors:  C J Jackson; J-L Foo; N Tokuriki; L Afriat; P D Carr; H-K Kim; G Schenk; D S Tawfik; D L Ollis
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-04       Impact factor: 11.205

5.  Molecular dynamics simulations of the detoxification of paraoxon catalyzed by phosphotriesterase.

Authors:  Xin Zhang; Ruibo Wu; Lingchun Song; Yuchun Lin; Menghai Lin; Zexing Cao; Wei Wu; Yirong Mo
Journal:  J Comput Chem       Date:  2009-11-30       Impact factor: 3.376

6.  Contribution of the active-site metal cation to the catalytic activity and to the conformational stability of phosphotriesterase: temperature- and pH-dependence.

Authors:  Daniel Rochu; Nathalie Viguié; Frédérique Renault; David Crouzier; Marie-Thérèse Froment; Patrick Masson
Journal:  Biochem J       Date:  2004-06-15       Impact factor: 3.857

7.  Identification of an opd (organophosphate degradation) gene in an Agrobacterium isolate.

Authors:  Irene Horne; Tara D Sutherland; Rebecca L Harcourt; Robyn J Russell; John G Oakeshott
Journal:  Appl Environ Microbiol       Date:  2002-07       Impact factor: 4.792

Review 8.  Enhancing organophosphate hydrolase efficacy via protein engineering and immobilization strategies.

Authors:  Priya Katyal; Stanley Chu; Jin Kim Montclare
Journal:  Ann N Y Acad Sci       Date:  2020-08-19       Impact factor: 5.691

9.  PCycDB: a comprehensive and accurate database for fast analysis of phosphorus cycling genes.

Authors:  Jiaxiong Zeng; Qichao Tu; Xiaoli Yu; Lu Qian; Cheng Wang; Longfei Shu; Fei Liu; Shengwei Liu; Zhijian Huang; Jianguo He; Qingyun Yan; Zhili He
Journal:  Microbiome       Date:  2022-07-04       Impact factor: 16.837

  9 in total

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