Literature DB >> 10074073

Analysis of elements involved in pseudoknot-dependent expression and regulation of the repA gene of an IncL/M plasmid.

V Athanasopoulos1, J Praszkier, A J Pittard.   

Abstract

Replication of the IncL/M plasmid pMU604 is controlled by a small antisense RNA molecule (RNAI), which, by inhibiting the formation of an RNA pseudoknot, regulates translation of the replication initiator protein, RepA. Efficient translation of the repA mRNA was shown to require the translation and correct termination of the leader peptide, RepB, and the formation of the pseudoknot. Although the pseudoknot was essential for the expression of repA, its presence was shown to interfere with the translation of repB. The requirement for pseudoknot formation could in large part be obviated by improving the ribosome binding region of repA, either by replacing the GUG start codon by AUG or by increasing the spacing between the start codon and the Shine-Dalgarno sequence (SD). The spacing between the distal pseudoknot sequence and the repA SD was shown to be suboptimal for maximal expression of repA.

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Year:  1999        PMID: 10074073      PMCID: PMC93579     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  40 in total

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Authors:  A C Chang; S N Cohen
Journal:  J Bacteriol       Date:  1978-06       Impact factor: 3.490

2.  How the ribosome moves along the mRNA during protein synthesis.

Authors:  D Beyer; E Skripkin; J Wadzack; K H Nierhaus
Journal:  J Biol Chem       Date:  1994-12-02       Impact factor: 5.157

3.  Structural analysis of an RNA molecule involved in replication control of plasmid R1.

Authors:  E Gerhart; H Wagner; K Nordström
Journal:  Nucleic Acids Res       Date:  1986-03-25       Impact factor: 16.971

4.  Analysis of the incompatibility determinants of I-complex plasmids.

Authors:  S Nikoletti; P Bird; J Praszkier; J Pittard
Journal:  J Bacteriol       Date:  1988-03       Impact factor: 3.490

5.  Copy mutants of plasmid R1: effects of base pair substitutions in the copA gene on the replication control system.

Authors:  M Givskov; S Molin
Journal:  Mol Gen Genet       Date:  1984

6.  The use of mini-Gal plasmids for rapid incompatibility grouping of conjugative R plasmids.

Authors:  R B Davey; P I Bird; S M Nikoletti; J Praszkier; J Pittard
Journal:  Plasmid       Date:  1984-05       Impact factor: 3.466

7.  New versatile cloning and sequencing vectors based on bacteriophage M13.

Authors:  M P Kieny; R Lathe; J P Lecocq
Journal:  Gene       Date:  1983-12       Impact factor: 3.688

8.  New M13 vectors for cloning.

Authors:  J Messing
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

9.  Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.

Authors:  C Yanisch-Perron; J Vieira; J Messing
Journal:  Gene       Date:  1985       Impact factor: 3.688

10.  Structural analysis of RNA molecules involved in plasmid copy number control.

Authors:  J Tamm; B Polisky
Journal:  Nucleic Acids Res       Date:  1983-09-24       Impact factor: 16.971

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  10 in total

1.  Pseudoknot-dependent translational coupling in repBA genes of the IncB plasmid pMU720 involves reinitiation.

Authors:  J Praszkier; A J Pittard
Journal:  J Bacteriol       Date:  2002-10       Impact factor: 3.490

2.  Replication control of staphylococcal multiresistance plasmid pSK41: an antisense RNA mediates dual-level regulation of Rep expression.

Authors:  Stephen M Kwong; Ronald A Skurray; Neville Firth
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

3.  Complete nucleotide sequence of the pCTX-M3 plasmid and its involvement in spread of the extended-spectrum beta-lactamase gene blaCTX-M-3.

Authors:  M Gołebiewski; I Kern-Zdanowicz; M Zienkiewicz; M Adamczyk; J Zylinska; A Baraniak; M Gniadkowski; J Bardowski; P Cegłowski
Journal:  Antimicrob Agents Chemother       Date:  2007-08-13       Impact factor: 5.191

4.  LaRA 2: parallel and vectorized program for sequence-structure alignment of RNA sequences.

Authors:  Jörg Winkler; Gianvito Urgese; Elisa Ficarra; Knut Reinert
Journal:  BMC Bioinformatics       Date:  2022-01-06       Impact factor: 3.169

Review 5.  Mechanisms of Theta Plasmid Replication in Enterobacteria and Implications for Adaptation to Its Host.

Authors:  Jay W Kim; Vega Bugata; Gerardo Cortés-Cortés; Giselle Quevedo-Martínez; Manel Camps
Journal:  EcoSal Plus       Date:  2020-11

Review 6.  pCTX-M3-Structure, Function, and Evolution of a Multi-Resistance Conjugative Plasmid of a Broad Recipient Range.

Authors:  Izabela Kern-Zdanowicz
Journal:  Int J Mol Sci       Date:  2021-04-27       Impact factor: 5.923

7.  Genome-based insights into the resistome and mobilome of multidrug-resistant Aeromonas sp. ARM81 isolated from wastewater.

Authors:  Marcin Adamczuk; Lukasz Dziewit
Journal:  Arch Microbiol       Date:  2016-09-02       Impact factor: 2.552

8.  OXA-48-Mediated Ceftazidime-Avibactam Resistance Is Associated with Evolutionary Trade-Offs.

Authors:  Christopher Fröhlich; Vidar Sørum; Ane Molden Thomassen; Pål Jarle Johnsen; Hanna-Kirsti S Leiros; Ørjan Samuelsen
Journal:  mSphere       Date:  2019-03-27       Impact factor: 4.389

Review 9.  Why is start codon selection so precise in eukaryotes?

Authors:  Katsura Asano
Journal:  Translation (Austin)       Date:  2014-03-12

10.  Identification of Plasmid-Encoded sRNAs in a blaNDM-1-Harboring Multidrug-Resistance Plasmid pNDM-HK in Enterobacteriaceae.

Authors:  Hoi-Kuan Kong; Xuan Liu; Wai U Lo; Qing Pan; Carmen O K Law; Ting F Chan; Pak L Ho; Terrence C K Lau
Journal:  Front Microbiol       Date:  2018-03-27       Impact factor: 5.640

  10 in total

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