Literature DB >> 10051564

tRNAVal-heterodimeric maxizymes with high potential as geneinactivating agents: simultaneous cleavage at two sites in HIV-1 Tat mRNA in cultured cells.

T Kuwabara1, M Warashina, A Nakayama, J Ohkawa, K Taira.   

Abstract

It has been demonstrated that shortened forms of (stem II-deleted) hammerhead ribozymes with low intrinsic activity form very active dimers with a common stem II (very active short ribozymes capable of forming dimers were designated maxizymes). Intracellular activities of heterodimeric maxizymes and conventional ribozymes, under the control of a human tRNAVal-promoter, were compared against the cleavage of HIV-1 tat mRNA. The pol III-driven maxizymes formed very active heterodimers, and they successfully cleaved HIV-1 tat mRNA in mammalian cells at two sites simultaneously. The cleaved fragments were identified directly by Northern blotting analysis. Despite the initial concerns that a complicated dimerization process and formation of inactive homodimers were involved in addition to the process of association with the target, the overall intracellular activities of tRNAVal-driven maxizymes were significantly higher in mammalian cells than those of two sets of independent, conventional hammerhead ribozymes that were targeted at the same two sites within HIV-1 tat mRNA. Because the tRNAVal-driven maxizymes tested to date have been more effective than tRNAVal-driven "standard" hammerhead ribozymes, the tRNAVal-driven heterodimeric maxizymes appear to have potential utility as gene-inactivating agents.

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Year:  1999        PMID: 10051564      PMCID: PMC26706          DOI: 10.1073/pnas.96.5.1886

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

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Authors:  M J McCall; P Hendry; P A Jennings
Journal:  Proc Natl Acad Sci U S A       Date:  1992-07-01       Impact factor: 11.205

2.  Rapid renaturation of complementary DNA strands mediated by cationic detergents: a role for high-probability binding domains in enhancing the kinetics of molecular assembly processes.

Authors:  B W Pontius; P Berg
Journal:  Proc Natl Acad Sci U S A       Date:  1991-09-15       Impact factor: 11.205

3.  Kinetic characterization of intramolecular and intermolecular hammerhead RNAs with stem II deletions.

Authors:  D M Long; O C Uhlenbeck
Journal:  Proc Natl Acad Sci U S A       Date:  1994-07-19       Impact factor: 11.205

4.  Formation of a catalytically active dimer by tRNA(Val)-driven short ribozymes.

Authors:  T Kuwabara; M Warashina; M Orita; S Koseki; J Ohkawa; K Taira
Journal:  Nat Biotechnol       Date:  1998-10       Impact factor: 54.908

5.  Kinetic selectivity of complementary nucleic acids: bcr-abl-directed antisense RNA and ribozymes.

Authors:  R Kronenwett; R Haas; G Sczakiel
Journal:  J Mol Biol       Date:  1996-06-21       Impact factor: 5.469

6.  A simple assay system for examination of the inhibitory potential in vivo of decoy RNAs, ribozymes and other drugs by measuring the Tat-mediated transcription of a fusion gene composed of the long terminal repeat of HIV-1 and a gene for luciferase.

Authors:  S Koseki; J Ohkawa; R Yamamoto; Y Takebe; K Taira
Journal:  J Control Release       Date:  1998-04-30       Impact factor: 9.776

7.  Phenotypic conversion of drug-resistant bacteria to drug sensitivity.

Authors:  C Guerrier-Takada; R Salavati; S Altman
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-05       Impact factor: 11.205

8.  Triple ribozyme-mediated down-regulation of the retinoblastoma gene.

Authors:  C M Benedict; W Pan; S E Loy; G A Clawson
Journal:  Carcinogenesis       Date:  1998-07       Impact factor: 4.944

9.  Intracellular immunization of human fetal cord blood stem/progenitor cells with a ribozyme against human immunodeficiency virus type 1.

Authors:  M Yu; M C Leavitt; M Maruyama; O Yamada; D Young; A D Ho; F Wong-Staal
Journal:  Proc Natl Acad Sci U S A       Date:  1995-01-31       Impact factor: 11.205

10.  Enhancement of hammerhead ribozyme catalysis by glyceraldehyde-3-phosphate dehydrogenase.

Authors:  M Sioud; L Jespersen
Journal:  J Mol Biol       Date:  1996-04-12       Impact factor: 5.469

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  6 in total

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Authors:  T Ohmichi; E T Kool
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

2.  HIV-1 LTR as a target for synthetic ribozyme-mediated inhibition of gene expression: site selection and inhibition in cell culture.

Authors:  B Bramlage; E Luzi; F Eckstein
Journal:  Nucleic Acids Res       Date:  2000-11-01       Impact factor: 16.971

3.  Significantly higher activity of a cytoplasmic hammerhead ribozyme than a corresponding nuclear counterpart: engineered tRNAs with an extended 3' end can be exported efficiently and specifically to the cytoplasm in mammalian cells.

Authors:  T Kuwabara; M Warashina; S Koseki; M Sano; J Ohkawa; K Nakayama; K Taira
Journal:  Nucleic Acids Res       Date:  2001-07-01       Impact factor: 16.971

4.  RNA-protein hybrid ribozymes that efficiently cleave any mRNA independently of the structure of the target RNA.

Authors:  M Warashina; T Kuwabara; Y Kato; M Sano; K Taira
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-08       Impact factor: 11.205

5.  Truncated product of the bifunctional DLST gene involved in biogenesis of the respiratory chain.

Authors:  Takashi Kanamori; Kiyomi Nishimaki; Sadamitsu Asoh; Yoshitomo Ishibashi; Iichiro Takata; Tomoko Kuwabara; Kazunari Taira; Haruyasu Yamaguchi; Shiro Sugihara; Tsuneo Yamazaki; Yasuo Ihara; Kyoko Nakano; Sadayuki Matuda; Shigeo Ohta
Journal:  EMBO J       Date:  2003-06-16       Impact factor: 11.598

6.  Effective suppression of Dengue fever virus in mosquito cell cultures using retroviral transduction of hammerhead ribozymes targeting the viral genome.

Authors:  Pruksa Nawtaisong; James Keith; Tresa Fraser; Velmurugan Balaraman; Andrey Kolokoltsov; Robert A Davey; Stephen Higgs; Ahmed Mohammed; Yupha Rongsriyam; Narumon Komalamisra; Malcolm J Fraser
Journal:  Virol J       Date:  2009-06-04       Impact factor: 4.099

  6 in total

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