Literature DB >> 10036190

A genomic region encompassing a cluster of olfactory receptor genes and a myosin light chain kinase (MYLK) gene is duplicated on human chromosome regions 3q13-q21 and 3p13.

V Brand-Arpon1, S Rouquier, H Massa, P J de Jong, C Ferraz, P A Ioannou, J G Demaille, B J Trask, D Giorgi.   

Abstract

The olfactory receptor (OR) multigene family is widely distributed in the human genome. We characterize here a new cluster of four OR genes (HGMW-approved symbols OR7E20P, OR7E6P, OR7E21P, and OR7E22P) on human chromosome 3p13 that is contained in an approximately 250-kb region. This region has been physically mapped, and a 106-kb portion containing the OR genes has been sequenced. All the OR sequences are disrupted by frameshifts and stop codons and appear to have arisen through local duplications. A myosin light chain kinase pseudogene (HGMW-approved symbol MYLKP) lies at one end of the OR gene cluster. Sequences spanning the entire region are also present at 3q13-q21, the site of the functional MYLK gene. This region duplicated locally before the divergence of primates, and the two paralogous copies were later separated to sites on either side of the centromere. This study increases our understanding of the evolution of the human genome. The 3p13 cluster is the first example of a tandem array of OR pseudogenes, and duplications of such clusters may account for the accumulation of a large number of pseudogenes in the human genome. Copyright 1999 Academic Press.

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Year:  1999        PMID: 10036190     DOI: 10.1006/geno.1998.5690

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  13 in total

1.  The olfactory receptor gene repertoire in primates and mouse: evidence for reduction of the functional fraction in primates.

Authors:  S Rouquier; A Blancher; D Giorgi
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-14       Impact factor: 11.205

2.  The mosaic structure of human pericentromeric DNA: a strategy for characterizing complex regions of the human genome.

Authors:  J E Horvath; S Schwartz; E E Eichler
Journal:  Genome Res       Date:  2000-06       Impact factor: 9.043

3.  Complex evolution of 7E olfactory receptor genes in segmental duplications.

Authors:  Tera Newman; Barbara J Trask
Journal:  Genome Res       Date:  2003-05       Impact factor: 9.043

4.  Novel polymorphisms in the myosin light chain kinase gene confer risk for acute lung injury.

Authors:  Li Gao; Audrey Grant; Indrani Halder; Roy Brower; Jonathan Sevransky; James P Maloney; Marc Moss; Carl Shanholtz; Charles R Yates; Gianfranco Umberto Meduri; Mark D Shriver; Roxann Ingersoll; Alan F Scott; Terri H Beaty; Jaideep Moitra; Shwu Fan Ma; Shui Q Ye; Kathleen C Barnes; Joe G N Garcia
Journal:  Am J Respir Cell Mol Biol       Date:  2006-01-06       Impact factor: 6.914

5.  Olfactory receptor-gene clusters, genomic-inversion polymorphisms, and common chromosome rearrangements.

Authors:  S Giglio; K W Broman; N Matsumoto; V Calvari; G Gimelli; T Neumann; H Ohashi; L Voullaire; D Larizza; R Giorda; J L Weber; D H Ledbetter; O Zuffardi
Journal:  Am J Hum Genet       Date:  2001-02-26       Impact factor: 11.025

6.  A transcribed pseudogene of MYLK promotes cell proliferation.

Authors:  Yoo Jeong Han; Shwu Fan Ma; Gregory Yourek; Yoon-Dong Park; Joe G N Garcia
Journal:  FASEB J       Date:  2011-03-25       Impact factor: 5.191

7.  Genomic structure and evolution of the ancestral chromosome fusion site in 2q13-2q14.1 and paralogous regions on other human chromosomes.

Authors:  Yuxin Fan; Elena Linardopoulou; Cynthia Friedman; Eleanor Williams; Barbara J Trask
Journal:  Genome Res       Date:  2002-11       Impact factor: 9.043

Review 8.  Genetics of canine olfaction and receptor diversity.

Authors:  Pascale Quignon; Maud Rimbault; Stéphanie Robin; Francis Galibert
Journal:  Mamm Genome       Date:  2011-11-13       Impact factor: 2.957

9.  Characterization of nonfunctional V1R-like pheromone receptor sequences in human.

Authors:  D Giorgi; C Friedman; B J Trask; S Rouquier
Journal:  Genome Res       Date:  2000-12       Impact factor: 9.043

10.  Mammalian olfactory receptors.

Authors:  Joerg Fleischer; Heinz Breer; Joerg Strotmann
Journal:  Front Cell Neurosci       Date:  2009-08-27       Impact factor: 5.505

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