Literature DB >> 10024242

Nonmethylated transposable elements and methylated genes in a chordate genome.

M W Simmen1, S Leitgeb, J Charlton, S J Jones, B R Harris, V H Clark, A Bird.   

Abstract

The genome of the invertebrate chordate Ciona intestinalis was found to be a stable mosaic of methylated and nonmethylated domains. Multiple copies of an apparently active long terminal repeat retrotransposon and a long interspersed element are nonmethylated and a large fraction of abundant short interspersed elements are also methylation free. Genes, by contrast, are predominantly methylated. These data are incompatible with the genome defense model, which proposes that DNA methylation in animals is primarily targeted to endogenous transposable elements. Cytosine methylation in this urochordate may be preferentially directed to genes.

Entities:  

Mesh:

Substances:

Year:  1999        PMID: 10024242     DOI: 10.1126/science.283.5405.1164

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  47 in total

1.  A sense of time and place--meeting report of HUGO Spatial Organisation of the Genome workshop, Edinburgh, 14-15 May 1999. Human Genome Organisation.

Authors:  W A Bickmore; J M Bridger
Journal:  Chromosome Res       Date:  1999       Impact factor: 5.239

2.  SINE retroposons can be used in vivo as nucleation centers for de novo methylation.

Authors:  P Arnaud; C Goubely; T Pélissier; J M Deragon
Journal:  Mol Cell Biol       Date:  2000-05       Impact factor: 4.272

3.  Methylation and expression of amplified esterase genes in the aphid Myzus persicae (Sulzer).

Authors:  L M Field
Journal:  Biochem J       Date:  2000-08-01       Impact factor: 3.857

4.  Genes and transposons are differentially methylated in plants, but not in mammals.

Authors:  Pablo D Rabinowicz; Lance E Palmer; Bruce P May; Michael T Hemann; Scott W Lowe; W Richard McCombie; Robert A Martienssen
Journal:  Genome Res       Date:  2003-12       Impact factor: 9.043

5.  Conservation and divergence of methylation patterning in plants and animals.

Authors:  Suhua Feng; Shawn J Cokus; Xiaoyu Zhang; Pao-Yang Chen; Magnolia Bostick; Mary G Goll; Jonathan Hetzel; Jayati Jain; Steven H Strauss; Marnie E Halpern; Chinweike Ukomadu; Kirsten C Sadler; Sriharsa Pradhan; Matteo Pellegrini; Steven E Jacobsen
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-15       Impact factor: 11.205

6.  Control of genic DNA methylation in Arabidopsis.

Authors:  Soichi Inagaki; Tetsuji Kakutani
Journal:  J Plant Res       Date:  2010-04-03       Impact factor: 2.629

Review 7.  Colorectal cancer: a model for epigenetic tumorigenesis.

Authors:  J J L Wong; N J Hawkins; R L Ward
Journal:  Gut       Date:  2006-07-13       Impact factor: 23.059

8.  Differential recruitment of methylated CpG binding domains by the orphan receptor GCNF initiates the repression and silencing of Oct4 expression.

Authors:  Peili Gu; Damien Le Menuet; Arthur C-K Chung; Austin J Cooney
Journal:  Mol Cell Biol       Date:  2006-10-09       Impact factor: 4.272

9.  CpG methylation is targeted to transcription units in an invertebrate genome.

Authors:  Miho M Suzuki; Alastair R W Kerr; Dina De Sousa; Adrian Bird
Journal:  Genome Res       Date:  2007-04-09       Impact factor: 9.043

10.  Epigenetic responses to drought stress in rice (Oryza sativa L.).

Authors:  A John Joel
Journal:  Physiol Mol Biol Plants       Date:  2013-07
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.