Literature DB >> 9965833

Reaction-diffusion master equation: A comparison with microscopic simulations.

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Abstract

Year:  1996        PMID: 9965833     DOI: 10.1103/physreve.54.6139

Source DB:  PubMed          Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics        ISSN: 1063-651X


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  21 in total

1.  A new method for choosing the computational cell in stochastic reaction-diffusion systems.

Authors:  Hye-Won Kang; Likun Zheng; Hans G Othmer
Journal:  J Math Biol       Date:  2011-11-10       Impact factor: 2.259

2.  Reaction-diffusion master equation, diffusion-limited reactions, and singular potentials.

Authors:  Samuel A Isaacson; David Isaacson
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-12-07

3.  The multinomial simulation algorithm for discrete stochastic simulation of reaction-diffusion systems.

Authors:  Sotiria Lampoudi; Dan T Gillespie; Linda R Petzold
Journal:  J Chem Phys       Date:  2009-03-07       Impact factor: 3.488

4.  Approaches to biosimulation of cellular processes.

Authors:  F J Bruggeman; H V Westerhoff
Journal:  J Biol Phys       Date:  2006-11-11       Impact factor: 1.365

5.  An accelerated algorithm for discrete stochastic simulation of reaction-diffusion systems using gradient-based diffusion and tau-leaping.

Authors:  Wonryull Koh; Kim T Blackwell
Journal:  J Chem Phys       Date:  2011-04-21       Impact factor: 3.488

6.  Reaction rates for mesoscopic reaction-diffusion kinetics.

Authors:  Stefan Hellander; Andreas Hellander; Linda Petzold
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-02-23

7.  Stochastic operator-splitting method for reaction-diffusion systems.

Authors:  TaiJung Choi; Mano Ram Maurya; Daniel M Tartakovsky; Shankar Subramaniam
Journal:  J Chem Phys       Date:  2012-11-14       Impact factor: 3.488

8.  Improved spatial direct method with gradient-based diffusion to retain full diffusive fluctuations.

Authors:  Wonryull Koh; Kim T Blackwell
Journal:  J Chem Phys       Date:  2012-10-21       Impact factor: 3.488

9.  Probability distributed time delays: integrating spatial effects into temporal models.

Authors:  Tatiana T Marquez-Lago; André Leier; Kevin Burrage
Journal:  BMC Syst Biol       Date:  2010-03-04

10.  Investigating the robustness of the classical enzyme kinetic equations in small intracellular compartments.

Authors:  Ramon Grima
Journal:  BMC Syst Biol       Date:  2009-10-08
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