Literature DB >> 9950690

The stem-loop binding protein (SLBP1) is present in coiled bodies of the Xenopus germinal vesicle.

J Abbott1, W F Marzluff, J G Gall.   

Abstract

The stem-loop binding protein (SLBP1) binds the 3' stem-loop of histone pre-mRNA and is required for efficient processing of histone transcripts in the nucleus. We examined the localization of SLBP1 in the germinal vesicle of Xenopus laevis oocytes. In spread preparations of germinal vesicle contents, an anti-SLBP1 antibody stained coiled bodies and specific chromosomal loci, including terminal granules, axial granules, and some loops. After injection of myc-tagged SLBP1 transcripts into the oocyte cytoplasm, newly translated myc-SLBP1 protein was detectable in coiled bodies within 4 h and in terminal and axial granules by 8 h. To identify the region(s) of SLBP1 necessary for subnuclear localization, we subcloned various parts of the SLBP1 cDNA and injected transcripts of these into the cytoplasm of oocytes. We determined that 113 amino acids at the carboxy terminus of SLBP1 are sufficient for coiled body localization and that disruption of a previously defined RNA-binding domain did not alter this localization. Coiled bodies also contain the U7 small nuclear ribonucleoprotein particle (snRNP), which participates in cleavage of the 3' end of histone pre-mRNA. The colocalization of SLBP1 and the U7 snRNP in the coiled body suggests coordinated control of their functions, perhaps through a larger histone-processing particle. Some coiled bodies are attached to the lampbrush chromosomes at the histone gene loci, consistent with the view that coiled bodies in the oocyte recruit histone-processing factors to the sites of histone pre-mRNA transcription. The non-histone chromosomal sites at which SLBP1 is found include the genes coding for 5 S rRNA, U1 snRNA, and U2 snRNA, suggesting a wider role for SLBP1 in the biosynthesis of small non-spliced RNAs.

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Year:  1999        PMID: 9950690      PMCID: PMC25182          DOI: 10.1091/mbc.10.2.487

Source DB:  PubMed          Journal:  Mol Biol Cell        ISSN: 1059-1524            Impact factor:   4.138


  47 in total

1.  Histone genes are located at the sphere loci of Xenopus lampbrush chromosomes.

Authors:  H G Callan; J G Gall; C Murphy
Journal:  Chromosoma       Date:  1991-12       Impact factor: 4.316

2.  Compensatory mutations suggest that base-pairing with a small nuclear RNA is required to form the 3' end of H3 messenger RNA.

Authors:  F Schaufele; G M Gilmartin; W Bannwarth; M L Birnstiel
Journal:  Nature       Date:  1986 Oct 30-Nov 5       Impact factor: 49.962

3.  Conserved terminal hairpin sequences of histone mRNA precursors are not involved in duplex formation with the U7 RNA but act as a target site for a distinct processing factor.

Authors:  A P Vasserot; F J Schaufele; M L Birnstiel
Journal:  Proc Natl Acad Sci U S A       Date:  1989-06       Impact factor: 11.205

4.  Giant readthrough transcription units at the histone loci on lampbrush chromosomes of the newt Notophthalmus.

Authors:  M O Diaz; J G Gall
Journal:  Chromosoma       Date:  1985       Impact factor: 4.316

5.  Multiple processing-defective mutations in a mammalian histone pre-mRNA are suppressed by compensatory changes in U7 RNA both in vivo and in vitro.

Authors:  U M Bond; T A Yario; J A Steitz
Journal:  Genes Dev       Date:  1991-09       Impact factor: 11.361

6.  Both conserved signals on mammalian histone pre-mRNAs associate with small nuclear ribonucleoproteins during 3' end formation in vitro.

Authors:  K L Mowry; J A Steitz
Journal:  Mol Cell Biol       Date:  1987-05       Impact factor: 4.272

7.  Biochemical demonstration of complex formation of histone pre-mRNA with U7 small nuclear ribonucleoprotein and hairpin binding factors.

Authors:  L Melin; D Soldati; R Mital; A Streit; D Schümperli
Journal:  EMBO J       Date:  1992-02       Impact factor: 11.598

8.  Generation of histone mRNA 3' ends by endonucleolytic cleavage of the pre-mRNA in a snRNP-dependent in vitro reaction.

Authors:  O Gick; A Krämer; W Keller; M L Birnstiel
Journal:  EMBO J       Date:  1986-06       Impact factor: 11.598

9.  A conserved family of nuclear phosphoproteins localized to sites of polymerase II transcription.

Authors:  M B Roth; A M Zahler; J A Stolk
Journal:  J Cell Biol       Date:  1991-11       Impact factor: 10.539

10.  Small nuclear ribonucleoproteins and heterogeneous nuclear ribonucleoproteins in the amphibian germinal vesicle: loops, spheres, and snurposomes.

Authors:  Z A Wu; C Murphy; H G Callan; J G Gall
Journal:  J Cell Biol       Date:  1991-05       Impact factor: 10.539

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  27 in total

1.  Assembly of the nuclear transcription and processing machinery: Cajal bodies (coiled bodies) and transcriptosomes.

Authors:  J G Gall; M Bellini; Z Wu; C Murphy
Journal:  Mol Biol Cell       Date:  1999-12       Impact factor: 4.138

2.  Nuclear domains enriched in RNA 3'-processing factors associate with coiled bodies and histone genes in a cell cycle-dependent manner.

Authors:  W Schul; I van Der Kraan; A G Matera; R van Driel; L de Jong
Journal:  Mol Biol Cell       Date:  1999-11       Impact factor: 4.138

3.  Replication-dependent histone gene expression is related to Cajal body (CB) association but does not require sustained CB contact.

Authors:  L S Shopland; M Byron; J L Stein; J B Lian; G S Stein; J B Lawrence
Journal:  Mol Biol Cell       Date:  2001-03       Impact factor: 4.138

4.  Interactions of U2 gene loci and their nuclear transcripts with Cajal (coiled) bodies: evidence for PreU2 within Cajal bodies.

Authors:  K P Smith; J B Lawrence
Journal:  Mol Biol Cell       Date:  2000-09       Impact factor: 4.138

Review 5.  Lampbrush chromosomes and associated bodies: new insights into principles of nuclear structure and function.

Authors:  Garry T Morgan
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

6.  Subnuclear localization and Cajal body targeting of transcription elongation factor TFIIS in amphibian oocytes.

Authors:  Abigail J Smith; Yan Ling; Garry T Morgan
Journal:  Mol Biol Cell       Date:  2003-03       Impact factor: 4.138

7.  Non-canonical Cajal bodies form in the nucleus of late stage avian oocytes lacking functional nucleolus.

Authors:  Tatiana Khodyuchenko; Elena Gaginskaya; Alla Krasikova
Journal:  Histochem Cell Biol       Date:  2012-03-02       Impact factor: 4.304

Review 8.  The Cajal body and histone locus body.

Authors:  Zehra Nizami; Svetlana Deryusheva; Joseph G Gall
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-05-26       Impact factor: 10.005

Review 9.  The Cajal body: a meeting place for spliceosomal snRNPs in the nuclear maze.

Authors:  David Stanek; Karla M Neugebauer
Journal:  Chromosoma       Date:  2006-03-31       Impact factor: 4.316

Review 10.  Formation of the 3' end of histone mRNA: getting closer to the end.

Authors:  Zbigniew Dominski; William F Marzluff
Journal:  Gene       Date:  2007-05-04       Impact factor: 3.688

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