Literature DB >> 9929474

Analysis of dynamic brain imaging data.

P P Mitra1, B Pesaran.   

Abstract

Modern imaging techniques for probing brain function, including functional magnetic resonance imaging, intrinsic and extrinsic contrast optical imaging, and magnetoencephalography, generate large data sets with complex content. In this paper we develop appropriate techniques for analysis and visualization of such imaging data to separate the signal from the noise and characterize the signal. The techniques developed fall into the general category of multivariate time series analysis, and in particular we extensively use the multitaper framework of spectral analysis. We develop specific protocols for the analysis of fMRI, optical imaging, and MEG data, and illustrate the techniques by applications to real data sets generated by these imaging modalities. In general, the analysis protocols involve two distinct stages: "noise" characterization and suppression, and "signal" characterization and visualization. An important general conclusion of our study is the utility of a frequency-based representation, with short, moving analysis windows to account for nonstationarity in the data. Of particular note are 1) the development of a decomposition technique (space-frequency singular value decomposition) that is shown to be a useful means of characterizing the image data, and 2) the development of an algorithm, based on multitaper methods, for the removal of approximately periodic physiological artifacts arising from cardiac and respiratory sources.

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Mesh:

Year:  1999        PMID: 9929474      PMCID: PMC1300074          DOI: 10.1016/S0006-3495(99)77236-X

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  13 in total

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2.  Re-examination of the evidence for low-dimensional, nonlinear structure in the human electroencephalogram.

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Journal:  Electroencephalogr Clin Neurophysiol       Date:  1996-03

3.  Retrospective estimation and correction of physiological artifacts in fMRI by direct extraction of physiological activity from MR data.

Authors:  T H Le; X Hu
Journal:  Magn Reson Med       Date:  1996-03       Impact factor: 4.668

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Authors:  W Denk; J H Strickler; W W Webb
Journal:  Science       Date:  1990-04-06       Impact factor: 47.728

5.  Functional architecture of cortex revealed by optical imaging of intrinsic signals.

Authors:  A Grinvald; E Lieke; R D Frostig; C D Gilbert; T N Wiesel
Journal:  Nature       Date:  1986 Nov 27-Dec 3       Impact factor: 49.962

6.  Voltage-sensitive dyes reveal a modular organization in monkey striate cortex.

Authors:  G G Blasdel; G Salama
Journal:  Nature       Date:  1986 Jun 5-11       Impact factor: 49.962

7.  A large change in axon fluorescence that provides a promising method for measuring membrane potential.

Authors:  H V Davila; B M Salzberg; L B Cohen; A S Waggoner
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8.  Dynamics of propagating waves in the olfactory network of a terrestrial mollusk: an electrical and optical study.

Authors:  D Kleinfeld; K R Delaney; M S Fee; J A Flores; D W Tank; A Gelperin
Journal:  J Neurophysiol       Date:  1994-09       Impact factor: 2.714

9.  Intrinsic signal changes accompanying sensory stimulation: functional brain mapping with magnetic resonance imaging.

Authors:  S Ogawa; D W Tank; R Menon; J M Ellermann; S G Kim; H Merkle; K Ugurbil
Journal:  Proc Natl Acad Sci U S A       Date:  1992-07-01       Impact factor: 11.205

10.  Human oscillatory brain activity near 40 Hz coexists with cognitive temporal binding.

Authors:  M Joliot; U Ribary; R Llinás
Journal:  Proc Natl Acad Sci U S A       Date:  1994-11-22       Impact factor: 11.205

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  397 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-18       Impact factor: 11.205

2.  Reduced neuronal inhibition and coordination of adolescent prefrontal cortex during motivated behavior.

Authors:  David A Sturman; Bita Moghaddam
Journal:  J Neurosci       Date:  2011-01-26       Impact factor: 6.167

3.  Determination of awareness in patients with severe brain injury using EEG power spectral analysis.

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Journal:  Clin Neurophysiol       Date:  2011-04-21       Impact factor: 3.708

4.  Predicting seizures from local field potentials recorded via intracortical microelectrode arrays.

Authors:  Mehdi Aghagolzadeh; Leigh R Hochberg; Sydney S Cash; Wilson Truccolo
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2016-08

5.  Communication between neocortex and hippocampus during sleep in rodents.

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-07       Impact factor: 11.205

6.  Power spectrum ranked independent component analysis of a periodic fMRI complex motor paradigm.

Authors:  Chad H Moritz; Baxter P Rogers; M Elizabeth Meyerand
Journal:  Hum Brain Mapp       Date:  2003-02       Impact factor: 5.038

7.  Beta oscillations in a large-scale sensorimotor cortical network: directional influences revealed by Granger causality.

Authors:  Andrea Brovelli; Mingzhou Ding; Anders Ledberg; Yonghong Chen; Richard Nakamura; Steven L Bressler
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-21       Impact factor: 11.205

8.  Local diversity and fine-scale organization of receptive fields in mouse visual cortex.

Authors:  Vincent Bonin; Mark H Histed; Sergey Yurgenson; R Clay Reid
Journal:  J Neurosci       Date:  2011-12-14       Impact factor: 6.167

9.  Dynamic Modulation of Beta Band Cortico-Muscular Coupling Induced by Audio-Visual Rhythms.

Authors:  Manuel Varlet; Sylvie Nozaradan; Laurel Trainor; Peter E Keller
Journal:  Cereb Cortex Commun       Date:  2020-08-05

10.  Hippocampal network dynamics constrain the time lag between pyramidal cells across modified environments.

Authors:  Kamran Diba; György Buzsáki
Journal:  J Neurosci       Date:  2008-12-10       Impact factor: 6.167

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