Literature DB >> 9929336

Knowledge discovery and data mining to assist natural language understanding.

A Wilcox1, G Hripcsak.   

Abstract

As natural language processing systems become more frequent in clinical use, methods for interpreting the output of these programs become increasingly important. These methods require the effort of a domain expert, who must build specific queries and rules for interpreting the processor output. Knowledge discovery and data mining tools can be used instead of a domain expert to automatically generate these queries and rules. C5.0, a decision tree generator, was used to create a rule base for a natural language understanding system. A general-purpose natural language processor using this rule base was tested on a set of 200 chest radiograph reports. When a small set of reports, classified by physicians, was used as the training set, the generated rule base performed as well as lay persons, but worse than physicians. When a larger set of reports, using ICD9 coding to classify the set, was used for training the system, the rule base performed worse than the physicians and lay persons. It appears that a larger, more accurate training set is needed to increase performance of the method.

Entities:  

Mesh:

Year:  1998        PMID: 9929336      PMCID: PMC2232072     

Source DB:  PubMed          Journal:  Proc AMIA Symp        ISSN: 1531-605X


  13 in total

1.  Artificial intelligence in pediatrics: important clinical signs in newborn syndromes.

Authors:  O Braaten
Journal:  Comput Biomed Res       Date:  1996-06

2.  Access to data: comparing AccessMed with Query by Review.

Authors:  G Hripcsak; B Allen; J J Cimino; R Lee
Journal:  J Am Med Inform Assoc       Date:  1996 Jul-Aug       Impact factor: 4.497

3.  Classification trees for decision making in long-term care.

Authors:  M Quartararo; P Glasziou; C B Kerr
Journal:  J Gerontol A Biol Sci Med Sci       Date:  1995-11       Impact factor: 6.053

4.  A general natural-language text processor for clinical radiology.

Authors:  C Friedman; P O Alderson; J H Austin; J J Cimino; S B Johnson
Journal:  J Am Med Inform Assoc       Date:  1994 Mar-Apr       Impact factor: 4.497

5.  MENELAS: an access system for medical records using natural language.

Authors:  P Zweigenbaum
Journal:  Comput Methods Programs Biomed       Date:  1994-10       Impact factor: 5.428

6.  Desperately seeking data: knowledge base-database links.

Authors:  G Hripcsak; S B Johnson; P D Clayton
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1993

7.  Unlocking clinical data from narrative reports: a study of natural language processing.

Authors:  G Hripcsak; C Friedman; P O Alderson; W DuMouchel; S B Johnson; P D Clayton
Journal:  Ann Intern Med       Date:  1995-05-01       Impact factor: 25.391

8.  Discordance of databases designed for claims payment versus clinical information systems. Implications for outcomes research.

Authors:  J G Jollis; M Ancukiewicz; E R DeLong; D B Pryor; L H Muhlbaier; D B Mark
Journal:  Ann Intern Med       Date:  1993-10-15       Impact factor: 25.391

9.  A comparison of logistic regression to decision-tree induction in a medical domain.

Authors:  W J Long; J L Griffith; H P Selker; R B D'Agostino
Journal:  Comput Biomed Res       Date:  1993-02

10.  Automated linkage of free-text descriptions of patients with a practice guideline.

Authors:  L A Lenert; M Tovar
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1993
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  5 in total

1.  Comparing expert systems for identifying chest x-ray reports that support pneumonia.

Authors:  W W Chapman; P J Haug
Journal:  Proc AMIA Symp       Date:  1999

2.  Classification algorithms applied to narrative reports.

Authors:  A Wilcox; G Hripcsak
Journal:  Proc AMIA Symp       Date:  1999

3.  A reliability study for evaluating information extraction from radiology reports.

Authors:  G Hripcsak; G J Kuperman; C Friedman; D F Heitjan
Journal:  J Am Med Inform Assoc       Date:  1999 Mar-Apr       Impact factor: 4.497

4.  Medical text representations for inductive learning.

Authors:  A Wilcox; G Hripcsak
Journal:  Proc AMIA Symp       Date:  2000

5.  The role of domain knowledge in automating medical text report classification.

Authors:  Adam B Wilcox; George Hripcsak
Journal:  J Am Med Inform Assoc       Date:  2003-03-28       Impact factor: 4.497

  5 in total

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