Literature DB >> 9925780

Cation transport: an example of structural based selectivity.

F Tian1, T A Cross.   

Abstract

Through the high-resolution structure of the gramicidin A channel in lamellar phase lipids and the characterization of specific ion peptide interactions, fundamental principles for ion channel selectivity and conductance efficiency are illustrated with atomic resolution detail. Delocalized cation binding in the first turn of the helix reduces the unfavorable entropy contribution upon binding. Stepwise dehydration minimizes the energy barrier for cation entry and provides valence selectivity in this channel. Three or more water molecules in the monovalent cation binding site result in flexibility in the cation solvation environment causing weak cation size selectivity. Lack of cation induced structural modification avoids the formation of a significant energy barrier, thus permitting efficient cation transport. Copyright 1999 Academic Press.

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Year:  1999        PMID: 9925780     DOI: 10.1006/jmbi.1998.2434

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  23 in total

1.  Validation of the single-stranded channel conformation of gramicidin A by solid-state NMR.

Authors:  F Kovacs; J Quine; T A Cross
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-06       Impact factor: 11.205

2.  Gramicidin A channel as a test ground for molecular dynamics force fields.

Authors:  Toby W Allen; Turgut Baştuğ; Serdar Kuyucak; Shin-Ho Chung
Journal:  Biophys J       Date:  2003-04       Impact factor: 4.033

3.  Role of the dielectric constants of membrane proteins and channel water in ion permeation.

Authors:  Turgut Baştuğ; Serdar Kuyucak
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

4.  Theoretical study of the structure and dynamic fluctuations of dioxolane-linked gramicidin channels.

Authors:  Ching-Hsing Yu; Samuel Cukierman; Régis Pomès
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

5.  Continuum electrostatics fails to describe ion permeation in the gramicidin channel.

Authors:  Scott Edwards; Ben Corry; Serdar Kuyucak; Shin-Ho Chung
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

Review 6.  Structural themes in ion channels.

Authors:  Declan A Doyle
Journal:  Eur Biophys J       Date:  2004-03-16       Impact factor: 1.733

7.  Gramicidin channels are internally gated.

Authors:  Tyson L Jones; Riqiang Fu; Frederick Nielson; Timothy A Cross; David D Busath
Journal:  Biophys J       Date:  2010-04-21       Impact factor: 4.033

8.  Influence of protein flexibility on the electrostatic energy landscape in gramicidin A.

Authors:  Ben Corry; Shin-Ho Chung
Journal:  Eur Biophys J       Date:  2004-11-05       Impact factor: 1.733

9.  Test of molecular dynamics force fields in gramicidin A.

Authors:  Turgut Bastug; Serdar Kuyucak
Journal:  Eur Biophys J       Date:  2005-02-12       Impact factor: 1.733

10.  Ion permeation through a narrow channel: using gramicidin to ascertain all-atom molecular dynamics potential of mean force methodology and biomolecular force fields.

Authors:  Toby W Allen; Olaf S Andersen; Benoit Roux
Journal:  Biophys J       Date:  2006-02-24       Impact factor: 4.033

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