Literature DB >> 9914252

RNA catalysis.

W G Scott1.   

Abstract

Our understanding of the relationship between the structure of RNA and its catalytic activity has advanced significantly in the past year. These advances include time-resolved crystallographic studies on the hammerhead ribozyme, as well as new structures of a group I intron, a lead(II)-cleavage ribozyme, a hepatitis delta virus ribozyme, and components of the spliceosome machinery and the peptidyl transferase center of the ribosome and, most significantly, the structure of the ribosome itself.

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Year:  1998        PMID: 9914252     DOI: 10.1016/s0959-440x(98)80091-2

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  14 in total

Review 1.  Composing life.

Authors:  D Segré; D Lancet
Journal:  EMBO Rep       Date:  2000-09       Impact factor: 8.807

Review 2.  Recent advances in the elucidation of the mechanisms of action of ribozymes.

Authors:  Y Takagi; M Warashina; W J Stec; K Yoshinari; K Taira
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

3.  Existence of efficient divalent metal ion-catalyzed and inefficient divalent metal ion-independent channels in reactions catalyzed by a hammerhead ribozyme.

Authors:  Jing-Min Zhou; De-Min Zhou; Yasuomi Takagi; Yasuhiro Kasai; Atsushi Inoue; Tadashi Baba; Kazunari Taira
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

4.  Protein-RNA interactions: a structural analysis.

Authors:  S Jones; D T Daley; N M Luscombe; H M Berman; J M Thornton
Journal:  Nucleic Acids Res       Date:  2001-02-15       Impact factor: 16.971

Review 5.  RNA nanotechnology: engineering, assembly and applications in detection, gene delivery and therapy.

Authors:  Peixuan Guo
Journal:  J Nanosci Nanotechnol       Date:  2005-12

6.  Role of Mg2+ in hammerhead ribozyme catalysis from molecular simulation.

Authors:  Tai-Sung Lee; Carlos Silva López; George M Giambasu; Monika Martick; William G Scott; Darrin M York
Journal:  J Am Chem Soc       Date:  2008-02-14       Impact factor: 15.419

7.  Insight into the role of Mg in hammerhead ribozyme catalysis from X-ray crystallography and molecular dynamics simulation.

Authors:  Tai-Sung Lee; Carlos Silva López; Monika Martick; William G Scott; Darrin M York
Journal:  J Chem Theory Comput       Date:  2007-03       Impact factor: 6.006

8.  Guidelines for SHAPE Reagent Choice and Detection Strategy for RNA Structure Probing Studies.

Authors:  Steven Busan; Chase A Weidmann; Arnab Sengupta; Kevin M Weeks
Journal:  Biochemistry       Date:  2019-05-30       Impact factor: 3.162

9.  Divalent Metal Ion Activation of a Guanine General Base in the Hammerhead Ribozyme: Insights from Molecular Simulations.

Authors:  Haoyuan Chen; Timothy J Giese; Barbara L Golden; Darrin M York
Journal:  Biochemistry       Date:  2017-06-12       Impact factor: 3.162

10.  Computational mutagenesis studies of hammerhead ribozyme catalysis.

Authors:  Tai-Sung Lee; Darrin M York
Journal:  J Am Chem Soc       Date:  2010-09-29       Impact factor: 15.419

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