Literature DB >> 9887305

Tn4371: A modular structure encoding a phage-like integrase, a Pseudomonas-like catabolic pathway, and RP4/Ti-like transfer functions.

C Merlin1, D Springael, A Toussaint.   

Abstract

Tn4371 is a 55-kb catabolic transposon originally isolated from Ralstonia eutropha A5 that encodes enzymes catalyzing the complete degradation of biphenyl. Unlike previously described transposons encoding similar genes for aromatic compound degradation. Tn4371 carries a phage-like degradation, Tn4371 integrase gene and RP4/Ti-like transfer genes. Tn4371 transposition involves an excision/integration process and, consistent with this site-specific recombination mechanism, the ends of the element are transiently covalently bound. Transposition is targeted to a limited number of sites on the CH34 chromosome and pMOL30 plasmid as well as on RP4. One of these sites consists of a 5'-TTTTTCAT-3' sequence which is also present between the covalently joined ends of the transposon. Conjugative transfer of Tn4371 could not yet be demonstrated although the functionality of its transfer machinery could be established through the identification of a second transposable element, Tn-bph, which contains the right half of Tn4371, including the bph catabolic gene cluster and the identified transfer genes. Tn-bph transfers by conjugation and integrates in a new host genome independently of the larger element. Tn4371 thus appears as composite transposon combining an enteric phage-like integration system, RP4/Ti-like conjugation genes, and Pseudomonas-like catabolic genes. Copyright 1999 Academic Press.

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Year:  1999        PMID: 9887305     DOI: 10.1006/plas.1998.1375

Source DB:  PubMed          Journal:  Plasmid        ISSN: 0147-619X            Impact factor:   3.466


  13 in total

1.  The biphenyl- and 4-chlorobiphenyl-catabolic transposon Tn4371, a member of a new family of genomic islands related to IncP and Ti plasmids.

Authors:  Ariane Toussaint; Christophe Merlin; Sébastien Monchy; M Abderrafi Benotmane; Raphaël Leplae; Max Mergeay; Dirk Springael
Journal:  Appl Environ Microbiol       Date:  2003-08       Impact factor: 4.792

Review 2.  Biphenyl dioxygenases: functional versatilities and directed evolution.

Authors:  Kensuke Furukawa; Hikaru Suenaga; Masatoshi Goto
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

3.  Comparative sequence analysis of the symbiosis island of Mesorhizobium loti strain R7A.

Authors:  John T Sullivan; Jodi R Trzebiatowski; Ruth W Cruickshank; Jerome Gouzy; Steven D Brown; Rachel M Elliot; Damien J Fleetwood; Nadine G McCallum; Uwe Rossbach; Gabriella S Stuart; Julie E Weaver; Richard J Webby; Frans J De Bruijn; Clive W Ronson
Journal:  J Bacteriol       Date:  2002-06       Impact factor: 3.490

4.  Occurrence of Tn4371-related mobile elements and sequences in (chloro)biphenyl-degrading bacteria.

Authors:  D Springael; A Ryngaert; C Merlin; A Toussaint; M Mergeay
Journal:  Appl Environ Microbiol       Date:  2001-01       Impact factor: 4.792

5.  Conjugal transfer of polychlorinated biphenyl/biphenyl degradation genes in Acidovorax sp. strain KKS102, which are located on an integrative and conjugative element.

Authors:  Yoshiyuki Ohtsubo; Yoko Ishibashi; Hideaki Naganawa; Satoshi Hirokawa; Satomi Atobe; Yuji Nagata; Masataka Tsuda
Journal:  J Bacteriol       Date:  2012-06-08       Impact factor: 3.490

6.  A 90-kilobase conjugative chromosomal element coding for biphenyl and salicylate catabolism in Pseudomonas putida KF715.

Authors:  A Nishi; K Tominaga; K Furukawa
Journal:  J Bacteriol       Date:  2000-04       Impact factor: 3.490

7.  Cloning, nucleotide sequencing, and functional analysis of a novel, mobile cluster of biodegradation genes from Pseudomonas aeruginosa strain JB2.

Authors:  W J Hickey; G Sabat; A S Yuroff; A R Arment; J Pérez-Lesher
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

8.  The complete genome sequence of Cupriavidus metallidurans strain CH34, a master survivalist in harsh and anthropogenic environments.

Authors:  Paul J Janssen; Rob Van Houdt; Hugo Moors; Pieter Monsieurs; Nicolas Morin; Arlette Michaux; Mohammed A Benotmane; Natalie Leys; Tatiana Vallaeys; Alla Lapidus; Sébastien Monchy; Claudine Médigue; Safiyh Taghavi; Sean McCorkle; John Dunn; Daniël van der Lelie; Max Mergeay
Journal:  PLoS One       Date:  2010-05-05       Impact factor: 3.240

9.  Transcriptomic assessment of isozymes in the biphenyl pathway of Rhodococcus sp. strain RHA1.

Authors:  Edmilson R Gonçalves; Hirofumi Hara; Daisuke Miyazawa; Julian E Davies; Lindsay D Eltis; William W Mohn
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

10.  Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements.

Authors:  Michael P Ryan; J Tony Pembroke; Catherine C Adley
Journal:  BMC Microbiol       Date:  2009-11-26       Impact factor: 3.605

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