Literature DB >> 9878427

The glutamine-rich domain of the Drosophila GAGA factor is necessary for amyloid fibre formation in vitro, but not for chromatin remodelling.

B Agianian1, K Leonard, E Bonte, H Van der Zandt, P B Becker, P A Tucker.   

Abstract

The Drosophila GAGA factor binds specifically to the sequence GAGAG, and synergises with nucleosome remodelling factor to remodel chromatin in vitro. It consists of an N-terminal domain (POZ/BTB) which mediates protein-protein interactions, a central region which contains the DNA-binding domain, and a C-terminal glutamine-rich region. It is shown that the glutamine-rich region is responsible for the formation of fibres in vitro which, on the basis of their tinctorial properties and CD spectra, may be classified as amyloid fibres. A large structural change, probably resulting in beta-sheet structure, is observed upon fibre formation. Mutants containing the central region, either alone or together with the glutamine-rich region, are largely lacking in secondary structure but they bind specifically to the cognate DNA and are able to remodel chromatin in vitro. Consequently, neither the N-terminal domain nor the C-terminal glutamine-rich regions of the GAGA factor are necessary for chromatin remodelling in vitro. Copyright 1999 Academic Press.

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Year:  1999        PMID: 9878427     DOI: 10.1006/jmbi.1998.2355

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  11 in total

Review 1.  Natively unfolded proteins: a point where biology waits for physics.

Authors:  Vladimir N Uversky
Journal:  Protein Sci       Date:  2002-04       Impact factor: 6.725

2.  GAGA factor and the TFIID complex collaborate in generating an open chromatin structure at the Drosophila melanogaster hsp26 promoter.

Authors:  Boris A Leibovitch; Quinn Lu; Lawrence R Benjamin; Yingyun Liu; David S Gilmour; Sarah C R Elgin
Journal:  Mol Cell Biol       Date:  2002-09       Impact factor: 4.272

Review 3.  Amyloidogenesis of natively unfolded proteins.

Authors:  Vladimir N Uversky
Journal:  Curr Alzheimer Res       Date:  2008-06       Impact factor: 3.498

4.  Compaction of chromatin by diverse Polycomb group proteins requires localized regions of high charge.

Authors:  Daniel J Grau; Brad A Chapman; Joe D Garlick; Mark Borowsky; Nicole J Francis; Robert E Kingston
Journal:  Genes Dev       Date:  2011-10-15       Impact factor: 11.361

5.  GAGA factor isoforms have distinct but overlapping functions in vivo.

Authors:  A J Greenberg; P Schedl
Journal:  Mol Cell Biol       Date:  2001-12       Impact factor: 4.272

6.  Kinetic principles underlying pioneer function of GAGA transcription factor in live cells.

Authors:  Xiaona Tang; Taibo Li; Sheng Liu; Jan Wisniewski; Qinsi Zheng; Yikang Rong; Luke D Lavis; Carl Wu
Journal:  Nat Struct Mol Biol       Date:  2022-07-14       Impact factor: 18.361

7.  Binding of Ni2+ to a histidine- and glutamine-rich protein, Hpn-like.

Authors:  Yi-Bo Zeng; Dong-Mei Zhang; Hongyan Li; Hongzhe Sun
Journal:  J Biol Inorg Chem       Date:  2008-06-19       Impact factor: 3.358

8.  Interaction between the GAGA factor and Mod(mdg4) proteins promotes insulator bypass in Drosophila.

Authors:  Larisa Melnikova; François Juge; Natalia Gruzdeva; Aleksandr Mazur; Giacomo Cavalli; Pavel Georgiev
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-01       Impact factor: 11.205

9.  Drosophila FACT contributes to Hox gene expression through physical and functional interactions with GAGA factor.

Authors:  Tsukasa Shimojima; Masahiro Okada; Takahiro Nakayama; Hitoshi Ueda; Katsuya Okawa; Akihiro Iwamatsu; Hiroshi Handa; Susumu Hirose
Journal:  Genes Dev       Date:  2003-06-18       Impact factor: 11.361

10.  Drosophila GAGA factor polyglutamine domains exhibit prion-like behavior.

Authors:  Muhammad Tariq; Renee Wegrzyn; Saima Anwar; Bernd Bukau; Renato Paro
Journal:  BMC Genomics       Date:  2013-06-03       Impact factor: 3.969

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