Literature DB >> 9873908

Landmark methods for forms without landmarks: morphometrics of group differences in outline shape.

F L Bookstein1.   

Abstract

Morphometrics, a new branch of statistics, combines tools from geometry, computer graphics and biometrics in techniques for the multivariate analysis of biological shape variation. Although medical image analysts typically prefer to represent scenes by way of curving outlines or surfaces, the most recent developments in this associated statistical methodology have emphasized the domain of landmark data: size and shape of configurations of discrete, named points in two or three dimensions. This paper introduces a combination of Procrustes analysis and thin-plate splines, the two most powerful tools of landmark-based morphometrics, for multivariate analysis of curving outlines in samples of biomedical images. The thin-plate spline is used to assign point-to-point correspondences, called semi-landmarks, between curves of similar but variable shape, while the standard algorithm for Procrustes shape averages and shape coordinates is altered to accord with the ways in which semi-landmarks formally differ from more traditional landmark loci. Subsequent multivariate statistics and visualization proceed mainly as in the landmark-based methods. The combination provides a range of complementary filters, from high pass to low pass, for effects on outline shape in grouped studies. The low-pass version is based on the spectrum of the spline, the high pass, on a familiar special case of Procrustes analysis. This hybrid method is demonstrated in a comparison of the shape of the corpus callosum from mid-sagittal sections of MRI of 25 human brains, 12 normal and 13 with schizophrenia.

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Year:  1997        PMID: 9873908     DOI: 10.1016/s1361-8415(97)85012-8

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  238 in total

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Authors:  J Ashburner; K J Friston
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2.  Image registration using a symmetric prior--in three dimensions.

Authors:  J Ashburner; J L Andersson; K J Friston
Journal:  Hum Brain Mapp       Date:  2000-04       Impact factor: 5.038

3.  Mathematical/computational challenges in creating deformable and probabilistic atlases of the human brain.

Authors:  P M Thompson; R P Woods; M S Mega; A W Toga
Journal:  Hum Brain Mapp       Date:  2000-02       Impact factor: 5.038

4.  The mammalian bony labyrinth reconsidered, introducing a comprehensive geometric morphometric approach.

Authors:  Philipp Gunz; Marissa Ramsier; Melanie Kuhrig; Jean-Jacques Hublin; Fred Spoor
Journal:  J Anat       Date:  2012-03-08       Impact factor: 2.610

5.  Amygdala-hippocampal shape differences in schizophrenia: the application of 3D shape models to volumetric MR data.

Authors:  Martha E Shenton; Guido Gerig; Robert W McCarley; Gábor Székely; Ron Kikinis
Journal:  Psychiatry Res       Date:  2002-08-20       Impact factor: 3.222

6.  Non-linear registration for brain images by maximising feature and intensity similarities with a Bayesian framework.

Authors:  J S Kim; J M Lee; J J Kim; B Y Choe; C H Oh; S H Nam; J S Kwon; S I Kim
Journal:  Med Biol Eng Comput       Date:  2003-07       Impact factor: 2.602

7.  Assessment of spatial normalization of whole-brain magnetic resonance images in children.

Authors:  Marko Wilke; Vincent J Schmithorst; Scott K Holland
Journal:  Hum Brain Mapp       Date:  2002-09       Impact factor: 5.038

8.  Gender-based differences in the shape of the human corpus callosum are associated with allometric variations.

Authors:  Emiliano Bruner; José Manuel de la Cuétara; Roberto Colom; Manuel Martin-Loeches
Journal:  J Anat       Date:  2012-02-01       Impact factor: 2.610

9.  Sexual dimorphism in multiple aspects of 3D facial symmetry and asymmetry defined by spatially dense geometric morphometrics.

Authors:  Peter Claes; Mark Walters; Mark D Shriver; David Puts; Greg Gibson; John Clement; Gareth Baynam; Geert Verbeke; Dirk Vandermeulen; Paul Suetens
Journal:  J Anat       Date:  2012-06-18       Impact factor: 2.610

10.  The presence of accessory cusps in chimpanzee lower molars is consistent with a patterning cascade model of development.

Authors:  Matthew M Skinner; Philipp Gunz
Journal:  J Anat       Date:  2010-07-12       Impact factor: 2.610

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