Literature DB >> 9866684

Contribution of component monosaccharides to the coordinates of neutral and sialyl pyridylaminated N-glycans on a two-dimensional sugar map.

N Tomiya1, N Takahashi.   

Abstract

High-performance liquid chromatography elution data on an amide-adsorption and a reverse-phase column, expressed in glucose units, of pyridylamino N-glycans have been analyzed with a new approach using multiple regression to obtain parameters for the contribution ascribable to each of 54 monosaccharide units. Our calculation was based on the 417 different N-glycan structures determined empirically. Depending on the increase in the amount of elution data, we got good correlation (r = 0.9998 for amide-silica and r = 0.9974 for octadecylsilica) and agreement between the observed and the calculated N-glycan elution coordinate values which correspond to the sum of the unit contribution of the component monosaccharides. These calculated values of unit contribution are useful in predicting glycan structure from an observed glucose unit on the map as well as to assume a glucose unit from a given structure. As an example of the application of the unit contribution values to the estimate of a sialyl N-glycan structure, the case of trisialyl triantennary N-glycans is described.

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Year:  1998        PMID: 9866684     DOI: 10.1006/abio.1998.2849

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  7 in total

1.  Facile removal of high mannose structures prior to extracting complex type N-glycans from de-N-glycosylated peptides retained by C18 solid phase to allow more efficient glycomic mapping.

Authors:  Chi-Hung Lin; Chu-Wei Kuo; Donald L Jarvis; Kay-Hooi Khoo
Journal:  Proteomics       Date:  2013-12-16       Impact factor: 3.984

2.  Sialic Acid Derivatization of Fluorescently Labeled N-Glycans Allows Linkage Differentiation by Reversed-Phase Liquid Chromatography-Fluorescence Detection-Mass Spectrometry.

Authors:  Alan B Moran; Richard A Gardner; Manfred Wuhrer; Guinevere S M Lageveen-Kammeijer; Daniel I R Spencer
Journal:  Anal Chem       Date:  2022-04-28       Impact factor: 8.008

3.  Sequential synthesis of chondroitin oligosaccharides by immobilized chondroitin polymerase mutants.

Authors:  Nobuo Sugiura; Satoshi Shimokata; Toshikazu Minamisawa; Jun Hirabayashi; Koji Kimata; Hideto Watanabe
Journal:  Glycoconj J       Date:  2008-02-05       Impact factor: 2.916

4.  An HPLC-MALDI MS method for N-glycan analyses using smaller size samples: application to monitor glycan modulation by medium conditions.

Authors:  Michael P Gillmeister; Noboru Tomiya; Scott J Jacobia; Yuan C Lee; Stephen F Gorfien; Michael J Betenbaugh
Journal:  Glycoconj J       Date:  2009-12       Impact factor: 2.916

Review 5.  Reversed-phase separation methods for glycan analysis.

Authors:  Gerda C M Vreeker; Manfred Wuhrer
Journal:  Anal Bioanal Chem       Date:  2016-11-25       Impact factor: 4.142

6.  Structural analysis of N-glycans in chicken trachea and lung reveals potential receptors of chicken influenza viruses.

Authors:  Noriko Suzuki; Tatsuya Abe; Shunji Natsuka
Journal:  Sci Rep       Date:  2022-02-08       Impact factor: 4.379

7.  Multistep Fractionation and Mass Spectrometry Reveal Zwitterionic and Anionic Modifications of the N- and O-glycans of a Marine Snail.

Authors:  Barbara Eckmair; Chunsheng Jin; Daniel Abed-Navandi; Katharina Paschinger
Journal:  Mol Cell Proteomics       Date:  2015-11-23       Impact factor: 7.381

  7 in total

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