Literature DB >> 9860833

Perturbation of the internal water chain in cytochrome f of oxygenic photosynthesis: loss of the concerted reduction of cytochromes f and b6.

M V Ponamarev1, W A Cramer.   

Abstract

The 1.96 A structure of turnip cytochrome f revealed a linear internal chain of H2O molecules with the oxygen atoms of the chain having occupancies and "B" factors comparable to those of neighboring atoms [Martinez et al. (1996) Protein Sci. 5, 1081-1092. ]. Four waters extend 11 A from the heme toward Lys66 on the cytochrome surface. All residues that contribute an atom to the 15 H-bonds of five internal H2O molecules are essentially conserved in 23 cytochrome sequences. With only Gln and Asn side chains involved in H-bonding, the water chain resembles a "proton wire". The function of the conserved H2O chain was tested through site-directed mutagenesis of these Asn and Gln residues. Four of the five conserved Asn/Gln residues were changed in six mutants generated in the green alga, Chlamydomonas reinhardtii. Except for the N168F mutant, all grew photosynthetically. Although the rates of oxidation of cyt f oxidation and of reduction of cyt b6 (5-6 ms in the wild type) were not significantly affected, the rates of cyt f reduction and generation of the slow electrochromic band shift (Deltapsis) were markedly decreased, the half-times increasing to as much as 38 and 18 ms, respectively. Thus, in these mutants, reduction of cyt b6 reduction clearly precedes that of cyt f. Retardation of Deltapsis in the absence of an observable change in the rate of cyt b6 reduction implied that the rate of H+ translocation decreased in the mutants, and electron transfer was concomitantly retarded, most likely between the ISP and cyt f. The following was concluded: (i) proton and electron transfer are coupled in reduction of cyt f, and the cyt f water chain functions in H+ transfer; (ii) reduction of the high- and low-potential chains in the b6f complex is not concerted in the water chain mutants; and (iii) quinol deprotonation and electron transfer from reduced quinone are initiated by an early event, probably the movement of the ISP triggered by oxidation of cyt f.

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Year:  1998        PMID: 9860833     DOI: 10.1021/bi981814j

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

1.  Proton wires are different.

Authors:  B Roux
Journal:  Biophys J       Date:  1999-11       Impact factor: 4.033

2.  The Cytochrome bc (1) Complex and its Homologue the b (6) f Complex: Similarities and Differences.

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Journal:  Photosynth Res       Date:  2004       Impact factor: 3.573

3.  Intraprotein transfer of the quinone analogue inhibitor 2,5-dibromo-3-methyl-6-isopropyl-p-benzoquinone in the cytochrome b6f complex.

Authors:  Jiusheng Yan; Genji Kurisu; William A Cramer
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-21       Impact factor: 11.205

Review 4.  pH-dependent regulation of electron transport and ATP synthesis in chloroplasts.

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Journal:  Photosynth Res       Date:  2013-05-22       Impact factor: 3.573

5.  Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.

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Review 6.  Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.

Authors:  Jing Liu; Saumen Chakraborty; Parisa Hosseinzadeh; Yang Yu; Shiliang Tian; Igor Petrik; Ambika Bhagi; Yi Lu
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7.  De Novo Construction of Redox Active Proteins.

Authors:  C C Moser; M M Sheehan; N M Ennist; G Kodali; C Bialas; M T Englander; B M Discher; P L Dutton
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Review 8.  Structure-function of the cytochrome b6f lipoprotein complex: a scientific odyssey and personal perspective.

Authors:  William A Cramer
Journal:  Photosynth Res       Date:  2018-10-11       Impact factor: 3.573

Review 9.  The Q cycle of cytochrome bc complexes: a structure perspective.

Authors:  William A Cramer; S Saif Hasan; Eiki Yamashita
Journal:  Biochim Biophys Acta       Date:  2011-02-23

10.  Cytochrome f from the Antarctic psychrophile, Chlamydomonas raudensis UWO 241: structure, sequence, and complementation in the mesophile, Chlamydomonas reinhardtii.

Authors:  Loreta Gudynaite-Savitch; Michael Gretes; Rachael M Morgan-Kiss; Leonid V Savitch; John Simmonds; Susanne E Kohalmi; Norman P A Hüner
Journal:  Mol Genet Genomics       Date:  2006-01-20       Impact factor: 3.291

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