Literature DB >> 9847382

"Hidden" dUTPase sequence in human immunodeficiency virus type 1 gp120.

C Abergel1, D L Robertson, J M Claverie.   

Abstract

A coding region homologous to the sequence for essential eukaryotic enzyme dUTPase has been identified in different genomic regions of several viral lineages. Unlike the nonprimate lentiviruses (caprine arthritis- encephalitis virus, equine infectious anemia virus, feline immunodeficiency virus, and visna virus), where dUTPase is integrated into the pol coding region, this enzyme has never been demonstrated to be present in the primate lentivirus genomes (human immunodeficiency virus type 1 [HIV-1], HIV-2, or the related simian immunodeficiency virus). A novel approach allowed us to identify a weak but significant sequence similarity between HIV-1 gp120 and the human dUTPase. This finding was then extended to all of the primate lentivirus lineages. Together with the recently reported fragmentary structural similarity between the V3 loop region and the Escherichia coli dUTPase (P. D. Kwong, R. Wyatt, J. Robinson, R. W. Sweet, J. Sodroski, and W. A. Hendrickson, Nature 393:648-659, 1998), our results strongly suggest that an ancestral dUTPase gene has evolved into the present primate lentivirus CD4 and cytokine receptor interacting region of gp120.

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Year:  1999        PMID: 9847382      PMCID: PMC103883     

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  15 in total

1.  Distinct subsets of retroviruses encode dUTPase.

Authors:  J H Elder; D L Lerner; C S Hasselkus-Light; D J Fontenot; E Hunter; P A Luciw; R C Montelaro; T R Phillips
Journal:  J Virol       Date:  1992-03       Impact factor: 5.103

2.  Incorporation of uracil into viral DNA correlates with reduced replication of EIAV in macrophages.

Authors:  W K Steagall; M D Robek; S T Perry; F J Fuller; S L Payne
Journal:  Virology       Date:  1995-07-10       Impact factor: 3.616

3.  Crystal structure of the Escherichia coli dUTPase in complex with a substrate analogue (dUDP).

Authors:  G Larsson; L A Svensson; P O Nyman
Journal:  Nat Struct Biol       Date:  1996-06

4.  Prediction of protein antigenic determinants from amino acid sequences.

Authors:  T P Hopp; K R Woods
Journal:  Proc Natl Acad Sci U S A       Date:  1981-06       Impact factor: 11.205

5.  Maturation stage and proliferation-dependent expression of dUTPase in human T cells.

Authors:  J R Strahler; X X Zhu; N Hora; Y K Wang; P C Andrews; N A Roseman; J V Neel; L Turka; S M Hanash
Journal:  Proc Natl Acad Sci U S A       Date:  1993-06-01       Impact factor: 11.205

6.  Human dUTP pyrophosphatase: cDNA sequence and potential biological importance of the enzyme.

Authors:  E M McIntosh; D D Ager; M H Gadsden; R H Haynes
Journal:  Proc Natl Acad Sci U S A       Date:  1992-09-01       Impact factor: 11.205

7.  Human immunodeficiency virus type 1 Vpr protein binds to the uracil DNA glycosylase DNA repair enzyme.

Authors:  M Bouhamdan; S Benichou; F Rey; J M Navarro; I Agostini; B Spire; J Camonis; G Slupphaug; R Vigne; R Benarous; J Sire
Journal:  J Virol       Date:  1996-02       Impact factor: 5.103

8.  Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody.

Authors:  P D Kwong; R Wyatt; J Robinson; R W Sweet; J Sodroski; W A Hendrickson
Journal:  Nature       Date:  1998-06-18       Impact factor: 49.962

9.  Increased mutation frequency of feline immunodeficiency virus lacking functional deoxyuridine-triphosphatase.

Authors:  D L Lerner; P C Wagaman; T R Phillips; O Prospero-Garcia; S J Henriksen; H S Fox; F E Bloom; J H Elder
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-01       Impact factor: 11.205

10.  dUTP pyrophosphatase is an essential enzyme in Saccharomyces cerevisiae.

Authors:  M H Gadsden; E M McIntosh; J C Game; P J Wilson; R H Haynes
Journal:  EMBO J       Date:  1993-11       Impact factor: 11.598

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  9 in total

1.  Evolution and horizontal transfer of dUTPase-encoding genes in viruses and their hosts.

Authors:  A M Baldo; M A McClure
Journal:  J Virol       Date:  1999-09       Impact factor: 5.103

2.  Structural genomics of highly conserved microbial genes of unknown function in search of new antibacterial targets.

Authors:  Chantal Abergel; Bruno Coutard; Deborah Byrne; Sabine Chenivesse; Jean-Baptiste Claude; Céline Deregnaucourt; Thierry Fricaux; Celine Gianesini-Boutreux; Sandra Jeudy; Régine Lebrun; Caroline Maza; Cédric Notredame; Olivier Poirot; Karsten Suhre; Majorie Varagnol; Jean-Michel Claverie
Journal:  J Struct Funct Genomics       Date:  2003

3.  Abundant non-canonical dUTP found in primary human macrophages drives its frequent incorporation by HIV-1 reverse transcriptase.

Authors:  Edward M Kennedy; Waaqo Daddacha; Rebecca Slater; Christina Gavegnano; Emilie Fromentin; Raymond F Schinazi; Baek Kim
Journal:  J Biol Chem       Date:  2011-03-31       Impact factor: 5.157

Review 4.  The molecular biology of feline immunodeficiency virus (FIV).

Authors:  Julia C Kenyon; Andrew M L Lever
Journal:  Viruses       Date:  2011-11-09       Impact factor: 5.048

Review 5.  Uracil within DNA: an actor of antiviral immunity.

Authors:  Joséphine Sire; Gilles Quérat; Cécile Esnault; Stéphane Priet
Journal:  Retrovirology       Date:  2008-06-05       Impact factor: 4.602

Review 6.  Viral dUTPases: Modulators of Innate Immunity.

Authors:  Maria Eugenia Ariza; Brandon Cox; Britney Martinez; Irene Mena-Palomo; Gloria Jeronimo Zarate; Marshall Vance Williams
Journal:  Biomolecules       Date:  2022-01-28

Review 7.  The biased nucleotide composition of the HIV genome: a constant factor in a highly variable virus.

Authors:  Antoinette C van der Kuyl; Ben Berkhout
Journal:  Retrovirology       Date:  2012-11-06       Impact factor: 4.602

Review 8.  dUTPase: the frequently overlooked enzyme encoded by many retroviruses.

Authors:  Amnon Hizi; Eytan Herzig
Journal:  Retrovirology       Date:  2015-08-12       Impact factor: 4.602

9.  Human herpesviruses-encoded dUTPases: a family of proteins that modulate dendritic cell function and innate immunity.

Authors:  Maria Eugenia Ariza; Ronald Glaser; Marshall V Williams
Journal:  Front Microbiol       Date:  2014-09-26       Impact factor: 5.640

  9 in total

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