Literature DB >> 9847215

Object oriented Transcription Factors Database (ooTFD).

D Ghosh1.   

Abstract

ooTFD is an object-oriented database for the representation of information pertaining to transcription factors, the proteins and biochemical entities which play a central role in the regulation of gene expression. Given the recent explosion of genome sequence information, and that a large percentage of proteins encoded by fully sequenced genomes fall into this category, information pertaining to this class of molecules may become an essential aspect of biology and of genomics in the 21st century. In the past year, there was a small increase in the size of this database, and a number of new tools to facilitate data access and analysis have been added at the MIRAGE (Molecular Informatics Resource for the Analysis of Gene Expression) web site. ooTFD and associated tools and resources can be accessed at http://www.ifti.org/

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Year:  1999        PMID: 9847215      PMCID: PMC148170          DOI: 10.1093/nar/27.1.315

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  3 in total

1.  Features of a unique intronless cluster of class I small heat shock protein genes in tandem with box C/D snoRNA genes on chromosome 6 in tomato (Solanum lycopersicum).

Authors:  Ravinder K Goyal; Vinod Kumar; Vijaya Shukla; Rohini Mattoo; Yongsheng Liu; Sang Ho Chung; James J Giovannoni; Autar K Mattoo
Journal:  Planta       Date:  2011-09-25       Impact factor: 4.116

2.  Impact of a disruption of a pathway delivering copper to mitochondria on Podospora anserina metabolism and life span.

Authors:  Stefan W Stumpferl; Oliver Stephan; Heinz D Osiewacz
Journal:  Eukaryot Cell       Date:  2004-02

3.  Computational identification of composite regulatory sites in 16s-rRNA gene promoters of Mycobacterium species.

Authors:  Neeraja Dwivedi; Surya Prakash Dwivedi; Ajay Kumar; Vishwa Mohan Katoch; Sanjay Mishra
Journal:  Bioinformation       Date:  2008-06-16
  3 in total

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