Literature DB >> 9847170

The Signal Recognition Particle Database (SRPDB).

T Samuelsson1, C Zwieb.   

Abstract

The signal recognition particle database (SRPDB) is located at the University of Texas Health Science Center at Tyler and includes tabulations of SRP RNA, SRP protein and SRP receptor sequences. The sequences are annotated with links to the primary databases. They are ordered alphabetically or phylogenetically and are available in aligned form. As of September, 1998, there were 108 SRP RNA sequences, 83 SRP protein sequences and 28 sequences of the SRP receptor alpha subunit and its homologues. In addition, the SRPDB provides search motifs consisting of conserved amino acid and nucleotide residues, and a limited number of SRP RNA secondary structure diagrams and 3-D models. The data are available freely at the URL http://psyche.uthct.edu/dbs/SRPDB/SRPDB.++ +html

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Year:  1999        PMID: 9847170      PMCID: PMC148125          DOI: 10.1093/nar/27.1.169

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  6 in total

1.  SRPDB (signal recognition particle database).

Authors:  C Zwieb; T Samuelsson
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  The Alu domain homolog of the yeast signal recognition particle consists of an Srp14p homodimer and a yeast-specific RNA structure.

Authors:  K Strub; M Fornallaz; N Bui
Journal:  RNA       Date:  1999-10       Impact factor: 4.942

3.  Anionic phospholipids are involved in membrane association of FtsY and stimulate its GTPase activity.

Authors:  E de Leeuw; K te Kaat; C Moser; G Menestrina; R Demel; B de Kruijff; B Oudega; J Luirink; I Sinning
Journal:  EMBO J       Date:  2000-02-15       Impact factor: 11.598

4.  The membrane-binding motif of the chloroplast signal recognition particle receptor (cpFtsY) regulates GTPase activity.

Authors:  Naomi J Marty; Dakshinamurthy Rajalingam; Alicia D Kight; Nathaniel E Lewis; Daniel Fologea; Thallapuranam Krishnaswamy Suresh Kumar; Ralph L Henry; Robyn L Goforth
Journal:  J Biol Chem       Date:  2009-03-17       Impact factor: 5.157

Review 5.  Dynamics of co-translational protein targeting.

Authors:  Margaret M Elvekrog; Peter Walter
Journal:  Curr Opin Chem Biol       Date:  2015-10-30       Impact factor: 8.822

6.  RAFFT: Efficient prediction of RNA folding pathways using the fast Fourier transform.

Authors:  Vaitea Opuu; Nono S C Merleau; Vincent Messow; Matteo Smerlak
Journal:  PLoS Comput Biol       Date:  2022-08-26       Impact factor: 4.779

  6 in total

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