Literature DB >> 9847139

The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1999.

A Bairoch1, R Apweiler.   

Abstract

SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotation (such as the description of the function of a protein, its domain structure, post-translational modifications, variants, etc.), a minimal level of redundancy and high level of integration with other databases. Recent developments of the database include: cross-references to additional databases; a variety of new documentation files and improvements to TrEMBL, a computer annotated supplement to SWISS-PROT. TrEMBL consists of entries in SWISS-PROT-like format derived from the translation of all coding sequences (CDS) in the EMBL nucleotide sequence database, except the CDS already included in SWISS-PROT. The URLs for SWISS-PROT on the WWW are: http://www.expasy.ch/sprot and http://www. ebi.ac.uk/sprot

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Year:  1999        PMID: 9847139      PMCID: PMC148094          DOI: 10.1093/nar/27.1.49

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  85 in total

1.  Transcription regulatory regions database (TRRD): its status in 2000.

Authors:  N A Kolchanov; O A Podkolodnaya; E A Ananko; E V Ignatieva; I L Stepanenko; O V Kel-Margoulis; A E Kel; T I Merkulova; T N Goryachkovskaya; T V Busygina; F A Kolpakov; N L Podkolodny; A N Naumochkin; I M Korostishevskaya; A G Romashchenko; G C Overton
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  The ASTRAL compendium for protein structure and sequence analysis.

Authors:  S E Brenner; P Koehl; M Levitt
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

3.  ProtoMap: automatic classification of protein sequences and hierarchy of protein families.

Authors:  G Yona; N Linial; M Linial
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

4.  PRINTS-S: the database formerly known as PRINTS.

Authors:  T K Attwood; M D Croning; D R Flower; A P Lewis; J E Mabey; P Scordis; J N Selley; W Wright
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

5.  Atlas of genetics and cytogenetics in oncology and haematology, an interactive database.

Authors:  J L Huret; S L Minor; F Dorkeld; P Dessen; A Bernheim
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

6.  A phylogenomic approach to microbial evolution.

Authors:  T Sicheritz-Pontén; S G Andersson
Journal:  Nucleic Acids Res       Date:  2001-01-15       Impact factor: 16.971

7.  Finding nuclear localization signals.

Authors:  M Cokol; R Nair; B Rost
Journal:  EMBO Rep       Date:  2000-11       Impact factor: 8.807

8.  Genetic identification of three ABC transporters as essential elements for nitrate respiration in Haloferax volcanii.

Authors:  C Wanner; J Soppa
Journal:  Genetics       Date:  1999-08       Impact factor: 4.562

9.  Expectations from structural genomics.

Authors:  S E Brenner; M Levitt
Journal:  Protein Sci       Date:  2000-01       Impact factor: 6.725

10.  Direct and reversed amino acid sequence pattern analysis: structural reasons for activity of reversed sequence sites and results of kinase site mutagenesis.

Authors:  I Torshin
Journal:  Biochem J       Date:  2000-02-01       Impact factor: 3.857

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