Literature DB >> 9843373

Glutamate 190 is a general acid catalyst in the 6-phosphogluconate-dehydrogenase-catalyzed reaction.

W E Karsten1, L Chooback, P F Cook.   

Abstract

Site-directed mutagenesis was used to change E190 of sheep liver 6-phosphogluconate dehydrogenase to A, D, H, K, Q, and R to probe its possible role as a general acid catalyst. Each of the mutant proteins was characterized with respect to the pH dependence of kinetic parameters. Mutations that eliminate a titrable group at position 190, result in pH-rate profiles with no observable pK on the basic side of the V/K6PG profile. Mutations that change the pK of the group at position 190 result in the expected pK perturbations in the V/K6PG profile. Kinetic parameters obtained at the pH optimum in the pH-rate profiles are consistent with a rate-limiting tautomerization of the 1,2-enediol of ribulose 5-phosphate consistent with the proposed role of E190. Data are also consistent with some participation of E190 in an isomerization required to form the active Michaelis complex.

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Year:  1998        PMID: 9843373     DOI: 10.1021/bi9812827

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  8 in total

1.  6-Phosphogluconate dehydrogenase mechanism: evidence for allosteric modulation by substrate.

Authors:  Stefania Hanau; Katy Montin; Carlo Cervellati; Morena Magnani; Franco Dallocchio
Journal:  J Biol Chem       Date:  2010-05-07       Impact factor: 5.157

2.  Crystal structures of a bacterial 6-phosphogluconate dehydrogenase reveal aspects of specificity, mechanism and mode of inhibition by analogues of high-energy reaction intermediates.

Authors:  Ramasubramanian Sundaramoorthy; Jorge Iulek; Michael P Barrett; Olivier Bidet; Gian Filippo Ruda; Ian H Gilbert; William N Hunter
Journal:  FEBS J       Date:  2007-01       Impact factor: 5.542

3.  Functional constraints of 6-phosphogluconate dehydrogenase (6-PGD) based on sequence and structural information.

Authors:  George N Goulielmos; Elias Eliopoulos; Michael Loukas; Spyros Tsakas
Journal:  J Mol Evol       Date:  2004-09       Impact factor: 2.395

4.  Virtual fragment screening for novel inhibitors of 6-phosphogluconate dehydrogenase.

Authors:  Gian Filippo Ruda; Gordon Campbell; Vincent P Alibu; Michael P Barrett; Ruth Brenk; Ian H Gilbert
Journal:  Bioorg Med Chem       Date:  2010-06-09       Impact factor: 3.641

5.  Structure and Mechanism of Isopropylmalate Dehydrogenase from Arabidopsis thaliana: INSIGHTS ON LEUCINE AND ALIPHATIC GLUCOSINOLATE BIOSYNTHESIS.

Authors:  Soon Goo Lee; Ronald Nwumeh; Joseph M Jez
Journal:  J Biol Chem       Date:  2016-05-02       Impact factor: 5.157

Review 6.  6-Phosphogluconate dehydrogenase and its crystal structures.

Authors:  Stefania Hanau; John R Helliwell
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2022-02-23       Impact factor: 1.056

7.  Geobacillus stearothermophilus 6-phosphogluconate dehydrogenase complexed with 6-phosphogluconate.

Authors:  Scott Cameron; Viviane P Martini; Jorge Iulek; William N Hunter
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-04-24

8.  Crystal structure of Saccharomyces cerevisiae 6-phosphogluconate dehydrogenase Gnd1.

Authors:  Weiwei He; Yi Wang; Wei Liu; Cong-Zhao Zhou
Journal:  BMC Struct Biol       Date:  2007-06-14
  8 in total

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