Literature DB >> 9837997

The fission yeast prp10(+) gene involved in pre-mRNA splicing encodes a homologue of highly conserved splicing factor, SAP155.

Y Habara1, S Urushiyama, T Tani, Y Ohshima.   

Abstract

In the fission yeast Schizosaccharomyces pombe, 14 prp (pre-mRNAprocessing) mutants have been isolated to date. We cloned the prp10(+) gene by complementation of the temperature-sensitive growth of prp10. Five types of transcripts were found that were alternatively spliced with respect to two possible introns located in the 5'-terminal region. Three of them are probably functional and code for putative proteins of approximately 1200 amino acids. Proteins highly homologous to Prp10p are present in other organisms, one of which is a human spliceosome-associated protein SAP155, a subunit of the splicing factor complex SF3. The C-terminal two-thirds of Prp10p is highly conserved among species, and contains consensus repeats for the regulatory subunit A of protein phosphatase PP2A. A gene disruption experiment indicated that the prp10(+) gene is essential for viability in S.pombe. Prp10p tagged with GFP is predominantly localized in the nuclear DNA region. A series of deletions showed that the less conserved N-terminal region of approximately 300 amino acids in Prp10p is dispensable, although the corresponding region was thought to play important roles in the mammalian splicing system.

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Year:  1998        PMID: 9837997      PMCID: PMC148038          DOI: 10.1093/nar/26.24.5662

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  24 in total

1.  Functional analysis of the human CDC5L complex and identification of its components by mass spectrometry.

Authors:  P Ajuh; B Kuster; K Panov; J C Zomerdijk; M Mann; A I Lamond
Journal:  EMBO J       Date:  2000-12-01       Impact factor: 11.598

2.  Mutation in the prp12+ gene encoding a homolog of SAP130/SF3b130 causes differential inhibition of pre-mRNA splicing and arrest of cell-cycle progression in Schizosaccharomyces pombe.

Authors:  Y Habara; S Urushiyama; T Shibuya; Y Ohshima; T Tani
Journal:  RNA       Date:  2001-05       Impact factor: 4.942

Review 3.  Analysis of the splicing machinery in fission yeast: a comparison with budding yeast and mammals.

Authors:  N F Käufer; J Potashkin
Journal:  Nucleic Acids Res       Date:  2000-08-15       Impact factor: 16.971

4.  Alternative splicing of transcripts of the transposon Restless is maintained in the foreign host Neurospora crassa and can be modified by introducing mutations at the 5' and 3' splice sites.

Authors:  Frank Kempken; Frank Windhofer
Journal:  Curr Genet       Date:  2004-05-18       Impact factor: 3.886

Review 5.  U2AF homology motifs: protein recognition in the RRM world.

Authors:  Clara L Kielkopf; Stephan Lücke; Michael R Green
Journal:  Genes Dev       Date:  2004-07-01       Impact factor: 11.361

6.  Genomic mRNA profiling reveals compensatory mechanisms for the requirement of the essential splicing factor U2AF.

Authors:  Vinod Sridharan; Joseph Heimiller; Ravinder Singh
Journal:  Mol Cell Biol       Date:  2010-12-13       Impact factor: 4.272

7.  spp42, identified as a classical suppressor of prp4-73, which encodes a kinase involved in pre-mRNA splicing in fission yeast, is a homologue of the splicing factor Prp8p.

Authors:  H Schmidt; K Richert; R A Drakas; N F Käufer
Journal:  Genetics       Date:  1999-11       Impact factor: 4.562

8.  Test of intron predictions reveals novel splice sites, alternatively spliced mRNAs and new introns in meiotically regulated genes of yeast.

Authors:  C A Davis; L Grate; M Spingola; M Ares
Journal:  Nucleic Acids Res       Date:  2000-04-15       Impact factor: 16.971

Review 9.  Spliceosomal factor mutations and mis-splicing in MDS.

Authors:  Courtney E Hershberger; Noah J Daniels; Richard A Padgett
Journal:  Best Pract Res Clin Haematol       Date:  2020-08-01       Impact factor: 3.020

10.  A conditional role of U2AF in splicing of introns with unconventional polypyrimidine tracts.

Authors:  Vinod Sridharan; Ravinder Singh
Journal:  Mol Cell Biol       Date:  2007-08-20       Impact factor: 4.272

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