Literature DB >> 9835597

Phylogenetic affiliation of soil bacteria that degrade aliphatic polyesters available commercially as biodegradable plastics.

T Suyama1, Y Tokiwa, P Ouichanpagdee, T Kanagawa, Y Kamagata.   

Abstract

Thirty-nine morphologically different soil bacteria capable of degrading poly(beta-hydroxyalkanoate), poly(epsilon-caprolactone), poly(hexamethylene carbonate), or poly(tetramethylene succinate) were isolated. Their phylogenetic positions were determined by 16S ribosomal DNA sequencing, and all of them fell into the classes Firmicutes and Proteobacteria. Determinations of substrate utilization revealed characteristic patterns of substrate specificities.

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Year:  1998        PMID: 9835597      PMCID: PMC90957     

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  11 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  16S ribosomal DNA amplification for phylogenetic study.

Authors:  W G Weisburg; S M Barns; D A Pelletier; D J Lane
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

3.  Bacterial isolates degrading aliphatic polycarbonates.

Authors:  T Suyama; H Hosoya; Y Tokiwa
Journal:  FEMS Microbiol Lett       Date:  1998-04-15       Impact factor: 2.742

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.

Authors:  J Brosius; M L Palmer; P J Kennedy; H F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

6.  Isolation and identification of poly(3-hydroxyvalerate)-degrading strains of Pseudomonas lemoignei.

Authors:  J Mergaert; A Schirmer; L Hauben; M Mau; B Hoste; K Kersters; D Jendrossek; J Swings
Journal:  Int J Syst Bacteriol       Date:  1996-07

7.  Isolation and characterization of novel iron-oxidizing bacteria that grow at circumneutral pH.

Authors:  D Emerson; C Moyer
Journal:  Appl Environ Microbiol       Date:  1997-12       Impact factor: 4.792

8.  Microbial degradation of an aliphatic polyester with a high melting point, poly(tetramethylene succinate).

Authors:  H Pranamuda; Y Tokiwa; H Tanaka
Journal:  Appl Environ Microbiol       Date:  1995-05       Impact factor: 4.792

9.  Polylactide Degradation by an Amycolatopsis sp.

Authors:  H Pranamuda; Y Tokiwa; H Tanaka
Journal:  Appl Environ Microbiol       Date:  1997-04       Impact factor: 4.792

10.  Roseateles depolymerans gen. nov., sp. nov., a new bacteriochlorophyll a-containing obligate aerobe belonging to the beta-subclass of the Proteobacteria.

Authors:  T Suyama; T Shigematsu; S Takaichi; Y Nodasaka; S Fujikawa; H Hosoya; Y Tokiwa; T Kanagawa; S Hanada
Journal:  Int J Syst Bacteriol       Date:  1999-04
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  18 in total

Review 1.  Study of microbes having potentiality for biodegradation of plastics.

Authors:  Swapan Kumar Ghosh; Sujoy Pal; Sumanta Ray
Journal:  Environ Sci Pollut Res Int       Date:  2013-04-24       Impact factor: 4.223

2.  Comparative in situ biodegradation studies of polyhydroxybutyrate film composites.

Authors:  Prasenjit Debbarma; Shikha Raghuwanshi; Jyoti Singh; Deep Chandra Suyal; M G H Zaidi; Reeta Goel
Journal:  3 Biotech       Date:  2017-06-29       Impact factor: 2.406

3.  Photosynthetic apparatus in Roseateles depolymerans 61A is transcriptionally induced by carbon limitation.

Authors:  Tetsushi Suyama; Toru Shigematsu; Toshihiko Suzuki; Yutaka Tokiwa; Takahiro Kanagawa; Kenji V P Nagashima; Satoshi Hanada
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

4.  Metabolic and genetic diversity of mesophilic and thermophilic bacteria isolated from composted municipal sludge on poly-epsilon-caprolactones.

Authors:  Igor Tiago; Isabel Teixeira; Sílvia Silva; Paula Chung; António Veríssimo; Célia M Manaia
Journal:  Curr Microbiol       Date:  2004-12       Impact factor: 2.188

5.  Cloning and sequencing of a poly(DL-lactic acid) depolymerase gene from Paenibacillus amylolyticus strain TB-13 and its functional expression in Escherichia coli.

Authors:  Yukie Akutsu-Shigeno; Teerawat Teeraphatpornchai; Kamonluck Teamtisong; Nobuhiko Nomura; Hiroo Uchiyama; Tadaatsu Nakahara; Toshiaki Nakajima-Kambe
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

6.  Microbial Degradation of Polyhydroxyalkanoates with Different Chemical Compositions and Their Biodegradability.

Authors:  Tatiana G Volova; Svetlana V Prudnikova; Olga N Vinogradova; Darya A Syrvacheva; Ekaterina I Shishatskaya
Journal:  Microb Ecol       Date:  2016-09-13       Impact factor: 4.552

7.  Enumeration and characterization of iron(III)-reducing microbial communities from acidic subsurface sediments contaminated with uranium(VI).

Authors:  Lainie Petrie; Nadia N North; Sherry L Dollhopf; David L Balkwill; Joel E Kostka
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

8.  Changes in microbial community composition and function during a polyaromatic hydrocarbon phytoremediation field trial.

Authors:  Steven D Siciliano; James J Germida; Kathy Banks; Charles W Greer
Journal:  Appl Environ Microbiol       Date:  2003-01       Impact factor: 4.792

9.  Members of the family Comamonadaceae as primary poly(3-hydroxybutyrate-co-3-hydroxyvalerate)-degrading denitrifiers in activated sludge as revealed by a polyphasic approach.

Authors:  Shams Tabrez Khan; Yoko Horiba; Masamitsu Yamamoto; Akira Hiraishi
Journal:  Appl Environ Microbiol       Date:  2002-07       Impact factor: 4.792

Review 10.  Biodegradability of plastics.

Authors:  Yutaka Tokiwa; Buenaventurada P Calabia; Charles U Ugwu; Seiichi Aiba
Journal:  Int J Mol Sci       Date:  2009-08-26       Impact factor: 6.208

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