Literature DB >> 9830313

Cooperative charge fluctuations by migrating protons in globular proteins.

G Careri1.   

Abstract

A review of the hydrogen bonded network on the protein surface shows the presence of a charged complex system with parallel and competitive interactions, including ionizable side-chains, migrating protons, bound water and nearby backbone peptides. This system displays cooperative effects of dynamical nature, reviewed for lysozyme as a case. By increasing the water coverage of the protein powder, the bound water cluster exhibits a percolative transition, detectable by the onset of large water-assisted displacements of migrating protons, with a parallel emergence of protein mobility and biological function. By lowering the temperature, migrating protons exhibit a glassy dielectric relaxation in the low frequency range, pointing to a frustration by competing interactions similar to that observed in spin glasses and fragile glass forming liquids. The observation of these dissipative processes implies the occurrence of spontaneous charge fluctuations. A simplified model of the protein surface, where conformational and ionizable side-chain fluctuations are averaged out, is used to discuss the statistical physics of these cooperative effects. Some biological implications of this dynamical cooperativity for enzymatic activity are briefly suggested at the end.

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Year:  1998        PMID: 9830313     DOI: 10.1016/s0079-6107(98)00030-3

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  10 in total

1.  A model for water motion in crystals of lysozyme based on an incoherent quasielastic neutron-scattering study.

Authors:  C Bon; A J Dianoux; M Ferrand; M S Lehmann
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

2.  Bulk-solvent and hydration-shell fluctuations, similar to alpha- and beta-fluctuations in glasses, control protein motions and functions.

Authors:  P W Fenimore; Hans Frauenfelder; B H McMahon; R D Young
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-24       Impact factor: 11.205

3.  Observation of fragile-to-strong dynamic crossover in protein hydration water.

Authors:  S-H Chen; L Liu; E Fratini; P Baglioni; A Faraone; E Mamontov
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-02       Impact factor: 11.205

4.  Protein folding is slaved to solvent motions.

Authors:  H Frauenfelder; P W Fenimore; G Chen; B H McMahon
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-09       Impact factor: 11.205

5.  Quantum behavior of water protons in protein hydration shell.

Authors:  S E Pagnotta; F Bruni; R Senesi; A Pietropaolo
Journal:  Biophys J       Date:  2009-03-04       Impact factor: 4.033

6.  Lewis-inspired representation of dissociable water in clusters and Grotthuss chains.

Authors:  Seyit Kale; Judith Herzfeld; Stacy Dai; Michael Blank
Journal:  J Biol Phys       Date:  2011-06-04       Impact factor: 1.365

7.  Bio-protective effects of homologous disaccharides on biological macromolecules.

Authors:  S Magazù; F Migliardo; A Benedetto; R La Torre; L Hennet
Journal:  Eur Biophys J       Date:  2011-10-30       Impact factor: 1.733

8.  Localized hydration in lyophilized myoglobin by hydrogen-deuterium exchange mass spectrometry. 1. Exchange mapping.

Authors:  Andreas M Sophocleous; Jun Zhang; Elizabeth M Topp
Journal:  Mol Pharm       Date:  2012-02-29       Impact factor: 4.939

Review 9.  The Role of Hydrogen Bonding in the Folding/Unfolding Process of Hydrated Lysozyme: A Review of Recent NMR and FTIR Results.

Authors:  Domenico Mallamace; Enza Fazio; Francesco Mallamace; Carmelo Corsaro
Journal:  Int J Mol Sci       Date:  2018-11-30       Impact factor: 5.923

10.  Purification, Biochemical and Kinetic Characterization of a Novel Alkaline sn-1,3-Regioselective Triacylglycerol Lipase from Penicilliumcrustosum Thom Strain P22 Isolated from Moroccan Olive Mill Wastewater.

Authors:  Ismail Hasnaoui; Ahlem Dab; Sondes Mechri; Houssam Abouloifa; Ennouamane Saalaoui; Bassem Jaouadi; Alexandre Noiriel; Abdeslam Asehraou; Abdelkarim Abousalham
Journal:  Int J Mol Sci       Date:  2022-10-07       Impact factor: 6.208

  10 in total

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