Literature DB >> 9829946

Corepression of the P1 addiction operon by Phd and Doc.

R Magnuson1, M B Yarmolinsky.   

Abstract

The P1 plasmid addiction operon encodes Doc, a toxin that kills plasmid-free segregants, and Phd, an unstable antidote that neutralizes the toxin. Additionally, these products repress transcription of the operon. The antidote binds to two adjacent sites in the promoter. Here we present evidence concerning the regulatory role of the toxin, which we studied with the aid of a mutation, docH66Y. The DocH66Y protein retained the regulatory properties of the wild-type protein, but not its toxicity. In vivo, DocH66Y enhanced repression by Phd but failed to affect repression in the absence of Phd, suggesting that DocH66Y contacts Phd. In vitro, a MalE-DocH66Y fusion protein was found to bind Phd. Binding of toxin to antidote may be the physical basis for the neutralization of toxin. DocH66Y failed to bind DNA in vitro yet enhanced the affinity, cooperativity, and specificity with which Phd bound the operator. Although DocH66Y enhanced the binding of Phd to two adjacent Phd-binding sites, DocH66Y had relatively little effect on the binding of Phd to a single Phd-binding site, indicating that DocH66Y mediates cooperative interactions between adjacent Phd-binding sites. Several electrophoretically distinct protein-DNA complexes were observed with different amounts of DocH66Y relative to Phd. Maximal repression and specificity of DNA binding were observed with subsaturating amounts of DocH66Y relative to Phd. Analogous antidote-toxin pairs appear to have similar autoregulatory circuits. Autoregulation, by dampening fluctuations in the levels of toxin and antidote, may prevent the inappropriate activation of the toxin.

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Year:  1998        PMID: 9829946      PMCID: PMC107722          DOI: 10.1128/JB.180.23.6342-6351.1998

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  55 in total

1.  Structural and functional comparison between the stability systems ParD of plasmid R1 and Ccd of plasmid F.

Authors:  M J Ruiz-Echevarría; G de Torrontegui; G Giménez-Gallego; R Díaz-Orejas
Journal:  Mol Gen Genet       Date:  1991-03

Review 2.  The interactions of transcription factors and their adaptors, coactivators and accessory proteins.

Authors:  K J Martin
Journal:  Bioessays       Date:  1991-10       Impact factor: 4.345

3.  The P1 plasmid partition complex at parS. The influence of Escherichia coli integration host factor and of substrate topology.

Authors:  B E Funnell
Journal:  J Biol Chem       Date:  1991-08-05       Impact factor: 5.157

Review 4.  The transactivator GAL4: co-activators, adaptors and chromatin.

Authors:  C A Stanway
Journal:  Bioessays       Date:  1991-05       Impact factor: 4.345

5.  The kis and kid genes of the parD maintenance system of plasmid R1 form an operon that is autoregulated at the level of transcription by the co-ordinated action of the Kis and Kid proteins.

Authors:  M J Ruiz-Echevarría; A Berzal-Herranz; K Gerdes; R Díaz-Orejas
Journal:  Mol Microbiol       Date:  1991-11       Impact factor: 3.501

6.  Autoregulation of the ccd operon in the F plasmid.

Authors:  R de Feyter; C Wallace; D Lane
Journal:  Mol Gen Genet       Date:  1989-09

7.  Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using Coomassie Brilliant Blue G-250 and R-250.

Authors:  V Neuhoff; N Arold; D Taube; W Ehrhardt
Journal:  Electrophoresis       Date:  1988-06       Impact factor: 3.535

8.  The F plasmid ccd autorepressor is a complex of CcdA and CcdB proteins.

Authors:  J E Tam; B C Kline
Journal:  Mol Gen Genet       Date:  1989-10

9.  Determination of binding constants for cooperative site-specific protein-DNA interactions using the gel mobility-shift assay.

Authors:  D F Senear; M Brenowitz
Journal:  J Biol Chem       Date:  1991-07-25       Impact factor: 5.157

10.  Control of the ccd operon in plasmid F.

Authors:  J E Tam; B C Kline
Journal:  J Bacteriol       Date:  1989-05       Impact factor: 3.490

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  51 in total

Review 1.  Toxin-antitoxin modules may regulate synthesis of macromolecules during nutritional stress.

Authors:  K Gerdes
Journal:  J Bacteriol       Date:  2000-02       Impact factor: 3.490

2.  Modular organization of the Phd repressor/antitoxin protein.

Authors:  Jeremy Allen Smith; Roy David Magnuson
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

3.  Crystal structures of Phd-Doc, HigA, and YeeU establish multiple evolutionary links between microbial growth-regulating toxin-antitoxin systems.

Authors:  Mark A Arbing; Samuel K Handelman; Alexandre P Kuzin; Grégory Verdon; Chi Wang; Min Su; Francesca P Rothenbacher; Mariam Abashidze; Mohan Liu; Jennifer M Hurley; Rong Xiao; Thomas Acton; Masayori Inouye; Gaetano T Montelione; Nancy A Woychik; John F Hunt
Journal:  Structure       Date:  2010-08-11       Impact factor: 5.006

4.  Structure of the Escherichia coli antitoxin MqsA (YgiT/b3021) bound to its gene promoter reveals extensive domain rearrangements and the specificity of transcriptional regulation.

Authors:  Breann L Brown; Thomas K Wood; Wolfgang Peti; Rebecca Page
Journal:  J Biol Chem       Date:  2010-11-09       Impact factor: 5.157

5.  Characterization of the Phd repressor-antitoxin boundary.

Authors:  James Estle McKinley; Roy David Magnuson
Journal:  J Bacteriol       Date:  2005-01       Impact factor: 3.490

6.  Percolation of the phd repressor-operator interface.

Authors:  Xueyan Zhao; Roy David Magnuson
Journal:  J Bacteriol       Date:  2005-03       Impact factor: 3.490

7.  ScoC and SinR negatively regulate epr by corepression in Bacillus subtilis.

Authors:  Prashant Kodgire; Madhulika Dixit; K Krishnamurthy Rao
Journal:  J Bacteriol       Date:  2006-09       Impact factor: 3.490

8.  Noncognate Mycobacterium tuberculosis toxin-antitoxins can physically and functionally interact.

Authors:  Ling Zhu; Jared D Sharp; Hiroshi Kobayashi; Nancy A Woychik; Masayori Inouye
Journal:  J Biol Chem       Date:  2010-09-27       Impact factor: 5.157

9.  Genome of bacteriophage P1.

Authors:  Małgorzata B Łobocka; Debra J Rose; Guy Plunkett; Marek Rusin; Arkadiusz Samojedny; Hansjörg Lehnherr; Michael B Yarmolinsky; Frederick R Blattner
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

10.  Crystallization of Doc and the Phd-Doc toxin-antitoxin complex.

Authors:  Abel Garcia-Pino; Minh-Hoa Dao-Thi; Ehud Gazit; Roy David Magnuson; Lode Wyns; Remy Loris
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-10-28
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