Literature DB >> 9828001

Role of the electrostatic loop charged residues in Cu,Zn superoxide dismutase.

F Polticelli1, A Battistoni, P O'Neill, G Rotilio, A Desideri.   

Abstract

We have expressed and characterized a mutant of Xenopus laevis Cu,Zn superoxide dismutase in which four highly conserved charged residues belonging to the electrostatic loop have been replaced by neutral side chains: Lys120 --> Leu, Asp130 --> Gln, Glu131 --> Gln, and Lys134 --> Thr. At low ionic strength, the mutant enzyme is one of the fastest superoxide dismutases ever assayed (k = 6.7 x 10(9) M(-1) s(-1), at pH 7 and mu = 0.02 M). Brownian dynamics simulations give rise to identical enzyme-substrate association rates for both wild-type and mutant enzymes, ruling out the possibility that enhancement of the activity is due to pure electrostatic factors. Comparative analysis of the experimental catalytic rate of the quadruple and single mutants reveals the nonadditivity of the mutation effects, indicating that the hyperefficiency of the mutant is due to a decrease of the energy barrier and/or to an alternative pathway for the diffusion of superoxide within the active site channel. At physiological ionic strength the catalytic rate of the mutant at neutral pH is similar to that of the wild-type enzyme as it is to the catalytic rate pH dependence. Moreover, mutation effects are additive. These results show that, at physiological salt conditions, electrostatic loop charged residues do not influence the diffusion pathway of the substrate and, if concomitantly neutralized, are not essential for high catalytic efficiency of the enzyme, pointing out the role of the metal cluster and of the invariant Arg141 in determining the local electrostatic forces facilitating the diffusion of the substrate towards the active site.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 9828001      PMCID: PMC2143875          DOI: 10.1002/pro.5560071112

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  29 in total

1.  Point charge distributions and electrostatic steering in enzyme/substrate encounter: Brownian dynamics of modified copper/zinc superoxide dismutases.

Authors:  J J Sines; S A Allison; J A McCammon
Journal:  Biochemistry       Date:  1990-10-09       Impact factor: 3.162

2.  Identification of the residues responsible for the alkaline inhibition of Cu,Zn superoxide dismutase: a site-directed mutagenesis approach.

Authors:  F Polticelli; A Battistoni; P O'Neill; G Rotilio; A Desideri
Journal:  Protein Sci       Date:  1996-02       Impact factor: 6.725

3.  Electrostatic steering and ionic tethering in enzyme-ligand binding: insights from simulations.

Authors:  R C Wade; R R Gabdoulline; S K Lüdemann; V Lounnas
Journal:  Proc Natl Acad Sci U S A       Date:  1998-05-26       Impact factor: 11.205

4.  Computational, pulse-radiolytic, and structural investigations of lysine-136 and its role in the electrostatic triad of human Cu,Zn superoxide dismutase.

Authors:  C L Fisher; D E Cabelli; R A Hallewell; P Beroza; T P Lo; E D Getzoff; J A Tainer
Journal:  Proteins       Date:  1997-09

5.  Effect of a molecular dipole on the ionic strength dependence of a biomolecular rate constant. Identification of the site of reaction.

Authors:  W H Koppenol
Journal:  Biophys J       Date:  1980-03       Impact factor: 4.033

6.  Determination and analysis of the 2 A-structure of copper, zinc superoxide dismutase.

Authors:  J A Tainer; E D Getzoff; K M Beem; J S Richardson; D C Richardson
Journal:  J Mol Biol       Date:  1982-09-15       Impact factor: 5.469

7.  Carbamoylation of Cu,Zn-superoxide dismutase by cyanate. Role of lysines in the enzyme action.

Authors:  D Cocco; L Rossi; D Barra; F Bossa; G Rotilio
Journal:  FEBS Lett       Date:  1982-12-27       Impact factor: 4.124

8.  Potential repair of free radical adducts of dGMP and dG by a series of reductants. A pulse radiolytic study.

Authors:  P O'Neill; P W Chapman
Journal:  Int J Radiat Biol Relat Stud Phys Chem Med       Date:  1985-01

9.  Temperature-dependent protein folding in vivo--lower growth temperature increases yield of two genetic variants of Xenopus laevis Cu,Zn superoxide dismutase in Escherichia coli.

Authors:  A Battistoni; M T Carrì; A P Mazzetti; G Rotilio
Journal:  Biochem Biophys Res Commun       Date:  1992-08-14       Impact factor: 3.575

10.  The role of arginine 143 in the electrostatics and mechanism of Cu,Zn superoxide dismutase: computational and experimental evaluation by mutational analysis.

Authors:  C L Fisher; D E Cabelli; J A Tainer; R A Hallewell; E D Getzoff
Journal:  Proteins       Date:  1994-05
View more
  7 in total

1.  Copper-zinc superoxide dismutase is activated through a sulfenic acid intermediate at a copper ion entry site.

Authors:  Morgan M Fetherolf; Stefanie D Boyd; Alexander B Taylor; Hee Jong Kim; James A Wohlschlegel; Ninian J Blackburn; P John Hart; Dennis R Winge; Duane D Winkler
Journal:  J Biol Chem       Date:  2017-05-22       Impact factor: 5.157

2.  Peroxynitrite-induced nitration of tyrosine-34 does not inhibit Escherichia coli iron superoxide dismutase.

Authors:  L Soulère; C Claparols; J Périé; P Hoffmann
Journal:  Biochem J       Date:  2001-12-15       Impact factor: 3.857

3.  Candida albicans SOD5 represents the prototype of an unprecedented class of Cu-only superoxide dismutases required for pathogen defense.

Authors:  Julie E Gleason; Ahmad Galaleldeen; Ryan L Peterson; Alexander B Taylor; Stephen P Holloway; Jessica Waninger-Saroni; Brendan P Cormack; Diane E Cabelli; P John Hart; Valeria Cizewski Culotta
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-07       Impact factor: 11.205

4.  Cupryphans, metal-binding, redox-active, redesigned conopeptides.

Authors:  Marco Barba; Anatoli P Sobolev; Cristina Romeo; M Eugenia Schininà; Donatella Pietraforte; Luisa Mannina; Giovanni Musci; Fabio Polticelli
Journal:  Protein Sci       Date:  2009-03       Impact factor: 6.725

5.  Cupricyclins, novel redox-active metallopeptides based on conotoxins scaffold.

Authors:  Marco Barba; Anatoli P Sobolev; Veranika Zobnina; Maria Carmela Bonaccorsi di Patti; Laura Cervoni; Maria Carolina Spiezia; M Eugenia Schininà; Donatella Pietraforte; Luisa Mannina; Giovanni Musci; Fabio Polticelli
Journal:  PLoS One       Date:  2012-02-03       Impact factor: 3.240

6.  Slow molecular recognition by RNA.

Authors:  Kristin R Gleitsman; Raghuvir N Sengupta; Daniel Herschlag
Journal:  RNA       Date:  2017-09-28       Impact factor: 4.942

7.  Enhancement of RNA/Ligand Association Kinetics via an Electrostatic Anchor.

Authors:  Raghuvir N Sengupta; Daniel Herschlag
Journal:  Biochemistry       Date:  2019-06-03       Impact factor: 3.162

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.