Literature DB >> 9818264

New developments in phase refinement.

J P Abrahams1, R A De Graaff.   

Abstract

A longstanding problem in X-ray crystallography is that vital information regarding the crystal phases in missing from the experimental data that are gathered in the diffraction experiment. Prior knowledge needs to be introduced in order to resolve phase ambiguities whenever the diffraction data are not sufficient to unequivocally reconstruct the crystal phases through anomalous or isomorphous differences. Very recent developments include progress in the application of direct methods to small proteins and other compounds of a similar small size (Shake 'n' Bake, SHELXD, CRUNCH and SIR96), bias-free refinement through the gamma-correction (Solomon), improvements in the determination of phase probability distributions (SHARP) and automated atomic refinement (wARP).

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Year:  1998        PMID: 9818264     DOI: 10.1016/s0959-440x(98)80151-6

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  4 in total

1.  Modeling of the structural features of integral-membrane proteins reverse-environment prediction of integral membrane protein structure (REPIMPS).

Authors:  S Dastmalchi; M B Morris; W B Church
Journal:  Protein Sci       Date:  2001-08       Impact factor: 6.725

2.  X-ray crystal structures of the WT and a hyper-accurate ribosome from Escherichia coli.

Authors:  Antón Vila-Sanjurjo; William K Ridgeway; Veysel Seymaner; Wen Zhang; Steve Santoso; Kexin Yu; Jamie H Doudna Cate
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-09       Impact factor: 11.205

3.  Bacteriophage T5 tail tube structure suggests a trigger mechanism for Siphoviridae DNA ejection.

Authors:  Charles-Adrien Arnaud; Grégory Effantin; Corinne Vivès; Sylvain Engilberge; Maria Bacia; Pascale Boulanger; Eric Girard; Guy Schoehn; Cécile Breyton
Journal:  Nat Commun       Date:  2017-12-05       Impact factor: 14.919

4.  ACE2 X-ray structures reveal a large hinge-bending motion important for inhibitor binding and catalysis.

Authors:  Paul Towler; Bart Staker; Sridhar G Prasad; Saurabh Menon; Jin Tang; Thomas Parsons; Dominic Ryan; Martin Fisher; David Williams; Natalie A Dales; Michael A Patane; Michael W Pantoliano
Journal:  J Biol Chem       Date:  2004-01-30       Impact factor: 5.157

  4 in total

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