Literature DB >> 9802956

Information content and free energy in DNA--protein interactions.

G D Stormo.   

Abstract

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Year:  1998        PMID： 9802956     DOI： 10.1006/jtbi.1998.0785

Source DB:  PubMed          Journal:  J Theor Biol        ISSN： 0022-5193            Impact factor:   2.691


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  23 in total

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2.  Additivity in protein-DNA interactions: how good an approximation is it?

Authors:  Panayiotis V Benos; Martha L Bulyk; Gary D Stormo
Journal:  Nucleic Acids Res       Date:  2002-10-15       Impact factor: 16.971

3.  WebLogo: a sequence logo generator.

Authors:  Gavin E Crooks; Gary Hon; John-Marc Chandonia; Steven E Brenner
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4.  A systematic model to predict transcriptional regulatory mechanisms based on overrepresentation of transcription factor binding profiles.

Authors:  Li-Wei Chang; Rakesh Nagarajan; Jeffrey A Magee; Jeffrey Milbrandt; Gary D Stormo
Journal:  Genome Res       Date:  2006-01-31       Impact factor: 9.043

5.  Cardioviral RNA structure logo analysis: entropy, correlations, and prediction.

Authors:  Xiao-Zhou Chen; Huai Cao; Wen Zhang; Ci-Quan Liu
Journal:  J Biol Phys       Date:  2009-08-29       Impact factor: 1.365

6.  Tissue-specific prediction of directly regulated genes.

Authors:  Robert C McLeay; Chris J Leat; Timothy L Bailey
Journal:  Bioinformatics       Date:  2011-06-30       Impact factor: 6.937

7.  Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data.

Authors:  Robert C McLeay; Timothy L Bailey
Journal:  BMC Bioinformatics       Date:  2010-04-01       Impact factor: 3.169

8.  The value of position-specific priors in motif discovery using MEME.

Authors:  Timothy L Bailey; Mikael Bodén; Tom Whitington; Philip Machanick
Journal:  BMC Bioinformatics       Date:  2010-04-09       Impact factor: 3.169

9.  New scoring schema for finding motifs in DNA Sequences.

Authors:  Fatemeh Zare-Mirakabad; Hayedeh Ahrabian; Mehdei Sadeghi; Abbas Nowzari-Dalini; Bahram Goliaei
Journal:  BMC Bioinformatics       Date:  2009-03-20       Impact factor: 3.169

10.  Optimizing static thermodynamic models of transcriptional regulation.

Authors:  Denis C Bauer; Timothy L Bailey
Journal:  Bioinformatics       Date:  2009-04-27       Impact factor: 6.937
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