Literature DB >> 9801759

Chromatin texture signatures in nuclei from prostate lesions.

P H Bartels1, V D da Silva, R Montironi, P W Hamilton, D Thompson, L Vaught, H G Bartels.   

Abstract

OBJECTIVE: To characterize nuclei from prostatic lesions in a highly specific manner by developing a nuclear chromatin texture signature and to characterize lesions by means of their composition of nuclei with diverse degrees of deviation from normal. STUDY
DESIGN: High-resolution digitized imagery of nuclei from normal prostates, from prostatic neoplastic lesions of low and high grade and from histologically normal appearing regions of prostates with low and high grade prostatic intraepithelial neoplasia (PIN) lesions were recorded. A set of 65 features descriptive of the spatial and statistical distribution of nuclear chromatin was computed for each nucleus. These features were arranged and processed to form a distinctive signature. A distance metric from "normal" was defined and computed for each nucleus.
RESULTS: Profiles of feature values can, after suitable scaling, be presented as distinctive feature value signatures. For many practical applications, profiles based on a standardized distance from normal nuclei may be more useful. Such profiles allow the derivation of a progression curve, showing increasing distances for diagnostic groups with increasing lesion progression up to high grade PIN lesions. Within each diagnostic group different cases show distinctive distributions of nuclei with differing degrees of deviation from normal, allowing the derivation of a lesion signature.
CONCLUSION: Nuclear chromatin texture signatures may be of value for the characterization of both nuclei and lesions. They are based on a more comprehensive use of information offered by the nuclear chromatin pattern than that included in classification methods. While these signatures offer a more specific characterization of a clinical sample, they also are subject to more variability within a diagnostic category. This may not be due to randomness but may reflect some actual differences between lesions.

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Year:  1998        PMID: 9801759

Source DB:  PubMed          Journal:  Anal Quant Cytol Histol        ISSN: 0884-6812            Impact factor:   0.302


  9 in total

Review 1.  Prostate cancer prevention: review of target populations, pathological biomarkers, and chemopreventive agents.

Authors:  R Montironi; R Mazzucchelli; J R Marshall; P H Bartels
Journal:  J Clin Pathol       Date:  1999-11       Impact factor: 3.411

2.  Nuclear chromatin texture and sensitivity to DNase I in human leukaemic CEM cells incubated with nanomolar okadaic acid.

Authors:  S Yatouji; F Liautaud-Roger; J Dufer
Journal:  Cell Prolif       Date:  2000-02       Impact factor: 6.831

3.  Karyometry of nuclear phenotypes in cutaneous squamous cell cancer.

Authors:  Peter H Bartels; Hubert G Bartels; David S Alberts; Michael Yozwiak; Anil R Prasad; Evan S Glazer; Robert S Krouse
Journal:  Anal Quant Cytol Histol       Date:  2012-02       Impact factor: 0.302

4.  Karyometry detects subvisual differences in chromatin organisation state between non-recurrent and recurrent papillary urothelial neoplasms of low malignant potential.

Authors:  M Scarpelli; R Montironi; L M Tarquini; P W Hamilton; A López Beltran; J Ranger-Moore; P H Bartels
Journal:  J Clin Pathol       Date:  2004-11       Impact factor: 3.411

5.  Chemopreventive efficacy of topical difluoromethylornithine and/or triamcinolone in the treatment of actinic keratoses analyzed by karyometry.

Authors:  Peter Bartels; Michael Yozwiak; Janine Einspahr; Kathylynn Saboda; Yun Liu; Christine Brooks; Hubert Bartels; David S Alberts
Journal:  Anal Quant Cytol Histol       Date:  2009-12       Impact factor: 0.302

6.  Nuclear image analysis study of neuroendocrine tumors.

Authors:  Meeja Park; Taehwa Baek; Jongho Baek; Hyunjin Son; Dongwook Kang; Jooheon Kim; Hyekyung Lee
Journal:  Korean J Pathol       Date:  2012-02-23

7.  Epigenetically induced changes in nuclear textural patterns and gelatinase expression in human fibrosarcoma cells.

Authors:  M Poplineau; C Doliwa; M Schnekenburger; F Antonicelli; M Diederich; A Trussardi-Régnier; J Dufer
Journal:  Cell Prolif       Date:  2013-04       Impact factor: 6.831

8.  Hyperacetylation in prostate cancer induces cell cycle aberrations, chromatin reorganization and altered gene expression profiles.

Authors:  Jenny A Watson; Declan J McKenna; Perry Maxwell; James Diamond; Ken Arthur; Valerie J McKelvey-Martin; Peter W Hamilton
Journal:  J Cell Mol Med       Date:  2009-07-06       Impact factor: 5.310

9.  Three-dimensional spatially resolved geometrical and functional models of human liver tissue reveal new aspects of NAFLD progression.

Authors:  Fabián Segovia-Miranda; Hernán Morales-Navarrete; Michael Kücken; Vincent Moser; Sarah Seifert; Urska Repnik; Fabian Rost; Mario Brosch; Alexander Hendricks; Sebastian Hinz; Christoph Röcken; Dieter Lütjohann; Yannis Kalaidzidis; Clemens Schafmayer; Lutz Brusch; Jochen Hampe; Marino Zerial
Journal:  Nat Med       Date:  2019-12-02       Impact factor: 53.440

  9 in total

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