Literature DB >> 9801324

The use of tailed octamer primers for cycle sequencing.

S Ball1, M A Reeve, P S Robinson, F Hill, D M Brown, D Loakes.   

Abstract

Studies have been carried out on the use of octamer oligonucleotides tailed with different base analogues as primers in cycle sequencing reactions. 5-Nitroindole tails improved the performance as primers of a number of octamers. A tail length of three or four 5-nitroindole residues significantly increased the sequencing signal intensity for almost all primers. The use of incomplete libraries of tailed octamer primers for primer walking is discussed.

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Year:  1998        PMID: 9801324      PMCID: PMC147975          DOI: 10.1093/nar/26.22.5225

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  6 in total

1.  NMR structure of a DNA duplex containing nucleoside analog 1-(2'-deoxy-beta-D-ribofuranosyl)-3-nitropyrrole and the structure of the unmodified control.

Authors:  D A Klewer; A Hoskins; P Zhang; V J Davisson; D E Bergstrom; A C LiWang
Journal:  Nucleic Acids Res       Date:  2000-11-15       Impact factor: 16.971

Review 2.  Survey and summary: The applications of universal DNA base analogues.

Authors:  D Loakes
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

3.  Octamer-primed sequencing technology: effects of dNTP supplementation.

Authors:  A I Kraltcheva; S H Hardin
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

4.  Whole genome analysis of genetic alterations in small DNA samples using hyperbranched strand displacement amplification and array-CGH.

Authors:  José M Lage; John H Leamon; Tanja Pejovic; Stefan Hamann; Michelle Lacey; Deborah Dillon; Richard Segraves; Bettina Vossbrinck; Antonio González; Daniel Pinkel; Donna G Albertson; Jose Costa; Paul M Lizardi
Journal:  Genome Res       Date:  2003-02       Impact factor: 9.043

5.  Template-directed ligation of tethered mononucleotides by t4 DNA ligase for kinase ribozyme selection.

Authors:  David G Nickens; Nirmala Bardiya; James T Patterson; Donald H Burke
Journal:  PLoS One       Date:  2010-08-24       Impact factor: 3.240

6.  Solution structure and dynamics of DNA duplexes containing the universal base analogues 5-nitroindole and 5-nitroindole 3-carboxamide.

Authors:  José Gallego; David Loakes
Journal:  Nucleic Acids Res       Date:  2007-04-16       Impact factor: 16.971

  6 in total

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