Literature DB >> 9801314

The primary function of a redundant Sp1 binding site in the mouse aprt gene promoter is to block epigenetic gene inactivation.

P Mummaneni1, P Yates, J Simpson, J Rose, M S Turker.   

Abstract

The promoter region of the mouse adenine phosphoribosyltransferase (aprt) gene contains one non-consensus Sp1 binding site at its 5' end followed by three consensus Sp1 binding sites. The two 3'-most binding sites are sufficient for maximal expression of aprt , suggesting that the non-consensus and consensus binding sites at the 5' end are redundant. However, the two 3' sites are not sufficient to block epigenetic inactivation, which led to the hypothesis that the redundant consensus and/or non-consensus 5' Sp1 binding sites are required to block inactivation events. To test this hypothesis, promoter region constructs were made in which the two 5' Sp1 binding sites were mutated alone or in tandem, and then each construct was tested for its ability to withstand epigenetic inactivation. A cis -acting methylation center that is normally located 1.2 kb upstream of the promoter was used to induce inactivation. The results demonstrate that the presence of the redundant consensus Sp1 binding site is required to block methylation-associated gene inactivation. Therefore, the Sp1 binding sites comprising the mouse aprt promoter have evolved two distinct functions, one to promote transcription and the other to block epigenetic inactivation.

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Year:  1998        PMID: 9801314      PMCID: PMC147958          DOI: 10.1093/nar/26.22.5163

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  26 in total

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3.  Genome architecture marked by retrotransposons modulates predisposition to DNA methylation in cancer.

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Journal:  Genome Res       Date:  2010-08-17       Impact factor: 9.043

4.  Aberrantly silenced promoters retain a persistent memory of the silenced state after long-term reactivation.

Authors:  Jon A Oyer; Phillip A Yates; Sarah Godsey; Mitchell S Turker
Journal:  Mutat Res       Date:  2010-10-28       Impact factor: 2.433

Review 5.  Notes on the role of dynamic DNA methylation in mammalian development.

Authors:  Timothy H Bestor; John R Edwards; Mathieu Boulard
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-03       Impact factor: 11.205

Review 6.  Gene regulation and genetics in neurochemistry, past to future.

Authors:  Steven W Barger
Journal:  J Neurochem       Date:  2016-10-17       Impact factor: 5.372

7.  Epigenetic silencing of the c-fms locus during B-lymphopoiesis occurs in discrete steps and is reversible.

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Journal:  EMBO J       Date:  2004-10-14       Impact factor: 11.598

8.  Targeting of de novo DNA methylation throughout the Oct-4 gene regulatory region in differentiating embryonic stem cells.

Authors:  Rodoniki Athanasiadou; Dina de Sousa; Kevin Myant; Cara Merusi; Irina Stancheva; Adrian Bird
Journal:  PLoS One       Date:  2010-04-01       Impact factor: 3.240

9.  Inherent promoter bidirectionality facilitates maintenance of sequence integrity and transcription of parasitic DNA in mammalian genomes.

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Journal:  BMC Genomics       Date:  2009-10-27       Impact factor: 3.969

Review 10.  Epigenetic mechanisms in mammals.

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Journal:  Cell Mol Life Sci       Date:  2009-02       Impact factor: 9.261

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