Literature DB >> 9783178

Completing the sequence of the Sulfolobus solfataricus P2 genome.

C W Sensen1, R L Charlebois, C Chow, I G Clausen, B Curtis, W F Doolittle, M Duguet, G Erauso, T Gaasterland, R A Garrett, P Gordon, I H de Jong, A C Jeffries, C Kozera, N Medina, A De Moors, J van der Oost, H Phan, M A Ragan, M E Schenk, Q She, R K Singh, N Tolstrup.   

Abstract

The Sulfolobus solfataricus P2 genome collaborators are poised to sequence the entire 3-Mbp genome of this crenarchaeote archaeon. About 80% of the genome has been sequenced to date, with the rest of the sequence being assembled fast. In this publication we introduce the genomic sequencing and automated analysis strategy and present intial data derived from the sequence analysis. After an overview of the general sequence features, metabolic pathway studies are explained, using sugar metabolism as an example. The paper closes with an overview of repetitive elements in S. solfataricus.

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Year:  1998        PMID: 9783178     DOI: 10.1007/s007920050073

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  18 in total

1.  Changes in cell size and DNA content in Sulfolobus cultures during dilution and temperature shift experiments.

Authors:  K Hjort; R Bernander
Journal:  J Bacteriol       Date:  1999-09       Impact factor: 3.490

2.  Extragenic pleiotropic mutations that repress glycosyl hydrolase expression in the hyperthermophilic archaeon Sulfolobus solfataricus.

Authors:  C Haseltine; R Montalvo-Rodriguez; A Carl; E Bini; P Blum
Journal:  Genetics       Date:  1999-08       Impact factor: 4.562

3.  High spontaneous mutation rate in the hyperthermophilic archaeon Sulfolobus solfataricus is mediated by transposable elements.

Authors:  E Martusewitsch; C W Sensen; C Schleper
Journal:  J Bacteriol       Date:  2000-05       Impact factor: 3.490

4.  The complete genome of the crenarchaeon Sulfolobus solfataricus P2.

Authors:  Q She; R K Singh; F Confalonieri; Y Zivanovic; G Allard; M J Awayez; C C Chan-Weiher; I G Clausen; B A Curtis; A De Moors; G Erauso; C Fletcher; P M Gordon; I Heikamp-de Jong; A C Jeffries; C J Kozera; N Medina; X Peng; H P Thi-Ngoc; P Redder; M E Schenk; C Theriault; N Tolstrup; R L Charlebois; W F Doolittle; M Duguet; T Gaasterland; R A Garrett; M A Ragan; C W Sensen; J Van der Oost
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-26       Impact factor: 11.205

5.  L-pyroglutamate spontaneously formed from L-glutamate inhibits growth of the hyperthermophilic archaeon Sulfolobus solfataricus.

Authors:  C B Park; S B Lee; D D Ryu
Journal:  Appl Environ Microbiol       Date:  2001-08       Impact factor: 4.792

6.  Absence of diauxie during simultaneous utilization of glucose and Xylose by Sulfolobus acidocaldarius.

Authors:  Chijioke J Joshua; Robert Dahl; Peter I Benke; Jay D Keasling
Journal:  J Bacteriol       Date:  2011-01-14       Impact factor: 3.490

7.  P63 regulates tubular formation via epithelial-to-mesenchymal transition.

Authors:  Y Zhang; W Yan; X Chen
Journal:  Oncogene       Date:  2013-04-01       Impact factor: 9.867

8.  Molecular analysis of pDL10 from Acidianus ambivalens reveals a family of related plasmids from extremely thermophilic and acidophilic archaea.

Authors:  A Kletzin; A Lieke; T Urich; R L Charlebois; C W Sensen
Journal:  Genetics       Date:  1999-08       Impact factor: 4.562

9.  A framework for classification of prokaryotic protein kinases.

Authors:  Nidhi Tyagi; Krishanpal Anamika; Narayanaswamy Srinivasan
Journal:  PLoS One       Date:  2010-05-26       Impact factor: 3.240

10.  Genes of de novo pyrimidine biosynthesis from the hyperthermoacidophilic crenarchaeote Sulfolobus acidocaldarius: novel organization in a bipolar operon.

Authors:  Thia-Lin Thia-Toong; Martine Roovers; Virginie Durbecq; Daniel Gigot; Nicolas Glansdorff; Daniel Charlier
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

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