Literature DB >> 9760267

Transient kinetic studies on the interaction of Ras and the Ras-binding domain of c-Raf-1 reveal rapid equilibration of the complex.

J R Sydor1, M Engelhard, A Wittinghofer, R S Goody, C Herrmann.   

Abstract

Transient kinetic methods have been used to analyze the interaction between the Ras-binding domain (RBD) of c-Raf-1 and a complex of H-Ras and a GTP analogue. The results obtained show that the binding is a two-step process, with an initial rapid equilibrium step being followed by an isomerization reaction occurring at several hundred per second. The reversal of this step determines the rate constant for dissociation, which is on the order of 10 s-1. The lifetime of the complex is therefore on the order of 50-100 ms, which is much shorter than the lifetime of GTP at the active site of H-Ras as determined by the intrinsic GTPase reaction. This suggests that multiple interactions of a single activated Ras molecule and Raf can occur, the number being limited by the competing interaction with GAP. The GDP complex of H-Ras binds more than 2 orders of magnitude more weakly than the GTP-analogue complex, mainly due to a significant weakening of the initial binding equilibrium reaction in the GDP state, thereby avoiding even short-lived recruitment of Raf to the plasma membrane by the inactive Ras form.

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Year:  1998        PMID: 9760267     DOI: 10.1021/bi980764f

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  39 in total

1.  Design, total chemical synthesis, and binding properties of a [Leu-91-N1-methyl-7-azaTrp]Ras-binding domain of c-Raf-1.

Authors:  J R Sydor; C Herrmann; S B Kent; R S Goody; M Engelhard
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-06       Impact factor: 11.205

2.  Total chemical synthesis of a functional interacting protein pair: the protooncogene H-Ras and the Ras-binding domain of its effector c-Raf1.

Authors:  Christian F W Becker; Christie L Hunter; Ralf Seidel; Stephen B H Kent; Roger S Goody; Martin Engelhard
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-18       Impact factor: 11.205

3.  Biochemical characterization of the Ran-RanBP1-RanGAP system: are RanBP proteins and the acidic tail of RanGAP required for the Ran-RanGAP GTPase reaction?

Authors:  Michael J Seewald; Astrid Kraemer; Marian Farkasovsky; Carolin Körner; Alfred Wittinghofer; Ingrid R Vetter
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

4.  Electrostatically optimized Ras-binding Ral guanine dissociation stimulator mutants increase the rate of association by stabilizing the encounter complex.

Authors:  C Kiel; T Selzer; Y Shaul; G Schreiber; C Herrmann
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-14       Impact factor: 11.205

5.  Relation between the conformational heterogeneity and reaction cycle of Ras: molecular simulation of Ras.

Authors:  Chigusa Kobayashi; Shinji Saito
Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

6.  Balancing between affinity and speed in target DNA search by zinc-finger proteins via modulation of dynamic conformational ensemble.

Authors:  Levani Zandarashvili; Alexandre Esadze; Dana Vuzman; Catherine A Kemme; Yaakov Levy; Junji Iwahara
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-31       Impact factor: 11.205

7.  Dynamic properties of the Ras switch I region and its importance for binding to effectors.

Authors:  M Spoerner; C Herrmann; I R Vetter; H R Kalbitzer; A Wittinghofer
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-24       Impact factor: 11.205

8.  Structural and Biochemical Basis for the Inhibitory Effect of Liprin-α3 on Mouse Diaphanous 1 (mDia1) Function.

Authors:  Julian Brenig; Susanne de Boor; Philipp Knyphausen; Nora Kuhlmann; Sarah Wroblowski; Linda Baldus; Lukas Scislowski; Oliver Artz; Philip Trauschies; Ulrich Baumann; Ines Neundorf; Michael Lammers
Journal:  J Biol Chem       Date:  2015-04-24       Impact factor: 5.157

9.  Role of phosphatidic acid in the coupling of the ERK cascade.

Authors:  Catherine A Kraft; José Luis Garrido; Eric Fluharty; Luis Leiva-Vega; Guillermo Romero
Journal:  J Biol Chem       Date:  2008-10-24       Impact factor: 5.157

10.  Improved binding of raf to Ras.GDP is correlated with biological activity.

Authors:  Christina Kiel; Daniel Filchtinski; Michael Spoerner; Gideon Schreiber; Hans Robert Kalbitzer; Christian Herrmann
Journal:  J Biol Chem       Date:  2009-09-23       Impact factor: 5.157

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