Literature DB >> 9758817

Determination of the biomasses of small bacteria at low concentrations in a mixture of species with forward light scatter measurements by flow cytometry

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Abstract

The forward light scatter intensity of bacteria analyzed by flow cytometry varied with their dry mass, in accordance with theory. A standard curve was formulated with Rayleigh-Gans theory to accommodate cell shape and alignment. It was calibrated with an extinction-culture isolate of the small marine organism Cycloclasticus oligotrophus, for which dry weight was determined by CHN analysis and 14C-acetate incorporation. Increased light scatter intensity due to formaldehyde accumulation in preserved cells was included in the standard curve. When differences in the refractive indices of culture media and interspecies differences in the effects of preservation were taken into account, there was agreement between cell mass obtained by flow cytometry for various bacterial species and cell mass computed from Coulter Counter volume and buoyant density. This agreement validated the standard curve and supported the assumption that cells were aligned in the flow stream. Several subpopulations were resolved in a mixture of three species analyzed according to forward light scatter and DNA-bound DAPI (4', 6-diamidino-2-phenylindole) fluorescence intensity. The total biomass of the mixture was 340 &mgr;g/liter. The lowest value for mean dry mass, 0.027 +/- 0.008 pg/cell, was for the subpopulation of C. oligotrophus containing cells with a single chromosome. Calculations from measurements of dry mass, Coulter Counter volume, and buoyant density revealed that the dry weight of the isolate was 14 to 18% of its wet weight, compared to 30% for Escherichia coli. The method is suitable for cells with 0.005 to about 1.2 pg of dry weight at concentrations of as low as 10(3) cells/ml and offers a unique capability for determining biomass distributions in mixed bacterial populations.

Entities:  

Year:  1998        PMID: 9758817      PMCID: PMC106576     

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  49 in total

1.  Isolation of Typical Marine Bacteria by Dilution Culture: Growth, Maintenance, and Characteristics of Isolates under Laboratory Conditions.

Authors:  F Schut; E J de Vries; J C Gottschal; B R Robertson; W Harder; R A Prins; D K Button
Journal:  Appl Environ Microbiol       Date:  1993-07       Impact factor: 4.792

2.  Kinetics of bacterial processes in natural aquatic systems based on biomass as determined by high-resolution flow cytometry.

Authors:  D K Button; B R Robertson
Journal:  Cytometry       Date:  1989-09

3.  Th size and shape of bacteria by light scattering measurements.

Authors:  A L Koch; E Ehrenfeld
Journal:  Biochim Biophys Acta       Date:  1968-09-03

4.  Determination of bacterial cell volume with the Coulter Counter.

Authors:  H E Kubitschek; J A Friske
Journal:  J Bacteriol       Date:  1986-12       Impact factor: 3.490

5.  In situ analysis of nucleic acids in cold-induced nonculturable Vibrio vulnificus.

Authors:  D Weichart; D McDougald; D Jacobs; S Kjelleberg
Journal:  Appl Environ Microbiol       Date:  1997-07       Impact factor: 4.792

6.  Responses to nutrient starvation in Pseudomonas putida KT2442: analysis of general cross-protection, cell shape, and macromolecular content.

Authors:  M Givskov; L Eberl; S Møller; L K Poulsen; S Molin
Journal:  J Bacteriol       Date:  1994-01       Impact factor: 3.490

7.  Cell cycle parameters of slowly growing Escherichia coli B/r studied by flow cytometry.

Authors:  K Skarstad; H B Steen; E Boye
Journal:  J Bacteriol       Date:  1983-05       Impact factor: 3.490

8.  Bacterial dry matter content and biomass estimations.

Authors:  G Bratbak; I Dundas
Journal:  Appl Environ Microbiol       Date:  1984-10       Impact factor: 4.792

9.  Escherichia coli growth studied by dual-parameter flow cytophotometry.

Authors:  H B Steen; E Boye
Journal:  J Bacteriol       Date:  1981-02       Impact factor: 3.490

10.  Buoyant density of Escherichia coli is determined solely by the osmolarity of the culture medium.

Authors:  W W Baldwin; R Myer; N Powell; E Anderson; A L Koch
Journal:  Arch Microbiol       Date:  1995-08       Impact factor: 2.552

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  22 in total

1.  Determination of total protein content of bacterial cells by SYPRO staining and flow cytometry.

Authors:  M V Zubkov; B M Fuchs; H Eilers; P H Burkill; R Amann
Journal:  Appl Environ Microbiol       Date:  1999-07       Impact factor: 4.792

2.  Sphingomonas alaskensis strain AFO1, an abundant oligotrophic ultramicrobacterium from the North Pacific.

Authors:  M Eguchi; M Ostrowski; F Fegatella; J Bowman; D Nichols; T Nishino; R Cavicchioli
Journal:  Appl Environ Microbiol       Date:  2001-11       Impact factor: 4.792

3.  Experimental and theoretical bases of specific affinity, a cytoarchitecture-based formulation of nutrient collection proposed to supercede the Michaelis-Menten paradigm of microbial kinetics.

Authors:  D K Button; Betsy Robertson; Elizabeth Gustafson; Xiaoming Zhao
Journal:  Appl Environ Microbiol       Date:  2004-09       Impact factor: 4.792

4.  Suitability of flow cytometry for estimating bacterial biovolume in natural plankton samples: comparison with microscopy data.

Authors:  Marisol Felip; Stefan Andreatta; Ruben Sommaruga; Viera Straskrábová; Jordi Catalan
Journal:  Appl Environ Microbiol       Date:  2007-05-18       Impact factor: 4.792

5.  Role of autofluorescence in flow cytometric analysis of Escherichia coli treated with bactericidal antibiotics.

Authors:  Sabine Renggli; Wolfgang Keck; Urs Jenal; Daniel Ritz
Journal:  J Bacteriol       Date:  2013-07-08       Impact factor: 3.490

6.  A small, dilute-cytoplasm, high-affinity, novel bacterium isolated by extinction culture and having kinetic constants compatible with growth at ambient concentrations of dissolved nutrients in seawater.

Authors:  D K Button; B R Robertson; P W Lepp; T M Schmidt
Journal:  Appl Environ Microbiol       Date:  1998-11       Impact factor: 4.792

7.  Carbon limitation induces sigma(S)-dependent gene expression in Pseudomonas fluorescens in soil.

Authors:  B Koch; J Worm; L E Jensen; O Højberg; O Nybroe
Journal:  Appl Environ Microbiol       Date:  2001-08       Impact factor: 4.792

8.  Determination of DNA content of aquatic bacteria by flow cytometry.

Authors:  D K Button; B R Robertson
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

9.  Application of flow cytometry to segregated kinetic modeling based on the physiological states of microorganisms.

Authors:  Covadonga Quirós; Mónica Herrero; Luis A García; Mario Díaz
Journal:  Appl Environ Microbiol       Date:  2007-05-04       Impact factor: 4.792

10.  Characterization of functionally distinct mitochondrial subpopulations.

Authors:  Janet E Saunders; Craig C Beeson; Rick G Schnellmann
Journal:  J Bioenerg Biomembr       Date:  2012-10-19       Impact factor: 2.945

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