Literature DB >> 9758770

Thermocrinis ruber gen. nov., sp. nov., A pink-filament-forming hyperthermophilic bacterium isolated from yellowstone national park

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Abstract

A novel hyperthermophilic bacterium was isolated from pink filamentous streamers (pink filaments) occurring in the upper outflow channel (temperature, 82 to 88 degreesC) of Octopus Spring in Yellowstone National Park, Wyo. The gram-negative cells grew at low salinity at temperatures up to 89 degreesC in the neutral to alkaline pH range. Depending on the culture conditions, the organisms occurred as single motile rods, as aggregates, or as long filaments that formed streamer-like cell masses. The novel isolate grew chemolithoautotrophically with hydrogen, thiosulfate, and elemental sulfur as electron donors and oxygen as the electron acceptor. Alternatively, under aerobic conditions, formate and formamide served as sole energy and carbon sources. The novel isolate had a 16S rRNA sequence closely related to the 16S rRNA sequence obtained from uncultivated pink filaments. It represents a new genus in the order Aquificales, the type species of which we name Thermocrinis ruber (type strain, OC 1/4 [= DSM 12173]).

Entities:  

Year:  1998        PMID: 9758770      PMCID: PMC106467     

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  21 in total

1.  Identifying members of the domain Archaea with rRNA-targeted oligonucleotide probes.

Authors:  S Burggraf; T Mayer; R Amann; S Schadhauser; C R Woese; K O Stetter
Journal:  Appl Environ Microbiol       Date:  1994-09       Impact factor: 4.792

Review 2.  Porins: general to specific, native to engineered passive pores.

Authors:  G E Schulz
Journal:  Curr Opin Struct Biol       Date:  1996-08       Impact factor: 6.809

3.  Reclassification of the crenarchael orders and families in accordance with 16S rRNA sequence data.

Authors:  S Burggraf; H Huber; K O Stetter
Journal:  Int J Syst Bacteriol       Date:  1997-07

Review 4.  Methanogens: reevaluation of a unique biological group.

Authors:  W E Balch; G E Fox; L J Magrum; C R Woese; R S Wolfe
Journal:  Microbiol Rev       Date:  1979-06

5.  The road to Yellowstone--and beyond.

Authors:  T D Brock
Journal:  Annu Rev Microbiol       Date:  1995       Impact factor: 15.500

6.  Formation of ammonium from nitrate during chemolithoautotrophic growth of the extremely thermophilic bacterium ammonifex degensii gen. nov. sp. nov.

Authors:  R Huber; P Rossnagel; C R Woese; R Rachel; T A Langworthy; K O Stetter
Journal:  Syst Appl Microbiol       Date:  1996-03       Impact factor: 4.022

7.  Pyrobaculum aerophilum sp. nov., a novel nitrate-reducing hyperthermophilic archaeum.

Authors:  P Völkl; R Huber; E Drobner; R Rachel; S Burggraf; A Trincone; K O Stetter
Journal:  Appl Environ Microbiol       Date:  1993-09       Impact factor: 4.792

8.  The Ribosomal Database Project (RDP).

Authors:  B L Maidak; G J Olsen; N Larsen; R Overbeek; M J McCaughey; C R Woese
Journal:  Nucleic Acids Res       Date:  1996-01-01       Impact factor: 16.971

9.  Phylogenetic position of the genus Hydrogenobacter.

Authors:  C Pitulle; Y Yang; M Marchiani; E R Moore; J L Siefert; M Aragno; P Jurtshuk; G E Fox
Journal:  Int J Syst Bacteriol       Date:  1994-10

10.  Fatty acids and polar lipids of extremely thermophilic filamentous bacterial masses from two Yellowstone hot springs.

Authors:  A J Bauman; P G Simmonds
Journal:  J Bacteriol       Date:  1969-05       Impact factor: 3.476

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  50 in total

1.  Genetic diversity of archaea in deep-sea hydrothermal vent environments.

Authors:  K Takai; K Horikoshi
Journal:  Genetics       Date:  1999-08       Impact factor: 4.562

Review 2.  Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability.

Authors:  C Vieille; G J Zeikus
Journal:  Microbiol Mol Biol Rev       Date:  2001-03       Impact factor: 11.056

3.  Influence of sulfide and temperature on species composition and community structure of hot spring microbial mats.

Authors:  S Skirnisdottir; G O Hreggvidsson; S Hjörleifsdottir; V T Marteinsson; S K Petursdottir; O Holst; J K Kristjansson
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

4.  Natural communities of novel archaea and bacteria growing in cold sulfurous springs with a string-of-pearls-like morphology.

Authors:  C Rudolph; G Wanner; R Huber
Journal:  Appl Environ Microbiol       Date:  2001-05       Impact factor: 4.792

5.  Isolation and metabolic characteristics of previously uncultured members of the order aquificales in a subsurface gold mine.

Authors:  Ken Takai; Hisako Hirayama; Yuri Sakihama; Fumio Inagaki; Yu Yamato; Koki Horikoshi
Journal:  Appl Environ Microbiol       Date:  2002-06       Impact factor: 4.792

6.  Molecular characterization of community structures and sulfur metabolism within microbial streamers in Japanese hot springs.

Authors:  Tatsunori Nakagawa; Manabu Fukui
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

7.  Microbial composition of near-boiling silica-depositing thermal springs throughout Yellowstone National Park.

Authors:  Carrine E Blank; Sherry L Cady; Norman R Pace
Journal:  Appl Environ Microbiol       Date:  2002-10       Impact factor: 4.792

8.  Effects of trace element concentrations on culturing thermophiles.

Authors:  D R Meyer-Dombard; E L Shock; J P Amend
Journal:  Extremophiles       Date:  2012-02-04       Impact factor: 2.395

9.  Phototrophic phylotypes dominate mesothermal microbial mats associated with hot springs in Yellowstone National Park.

Authors:  Kimberly A Ross; Leah M Feazel; Charles E Robertson; Babu Z Fathepure; Katherine E Wright; Rebecca M Turk-Macleod; Mallory M Chan; Nicole L Held; John R Spear; Norman R Pace
Journal:  Microb Ecol       Date:  2012-02-11       Impact factor: 4.552

10.  Insight into the evolution of microbial metabolism from the deep-branching bacterium, Thermovibrio ammonificans.

Authors:  Donato Giovannelli; Stefan M Sievert; Michael Hügler; Stephanie Markert; Dörte Becher; Thomas Schweder; Costantino Vetriani
Journal:  Elife       Date:  2017-04-24       Impact factor: 8.140

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