Literature DB >> 9755216

A high-resolution linkage map of the citrus tristeza virus resistance gene region in Poncirus trifoliata (L.) Raf.

D Q Fang1, C T Federici, M L Roose.   

Abstract

Resistance to citrus tristeza virus (CTV) was evaluated in 554 progeny of 10 populations derived from Poncirus trifoliata. A dominant gene (Ctv) controlled CTV resistance in P. trifoliata. Twenty-one dominant PCR-based DNA markers were identified as linked to Ctv by bulked segregant analysis. Of the 11 closest markers to Ctv, only 2 segregated in all populations. Ten of these markers were cloned and sequenced, and codominant RFLP markers were developed. Seven RFLP markers were then evaluated in 10 populations. Marker orders were consistent in all linkage maps based on data of single populations or on combined data of populations with similar segregation patterns. In a consensus map, the six closest marker loci spanned 5.3 cM of the Ctv region. Z16 cosegregated with Ctv. C19 and AD08 flanked Ctv at distances of 0.5 and 0.8 cM, respectively. These 3 markers were present as single copies in the Poncirus genome, and could be used directly for bacterial artificial chromosome library screening to initiate a walk toward Ctv. BLAST searches of the GenBank database revealed high sequence similarities between 2 markers and known plant disease resistance genes, indicating that a resistance gene cluster exists in the Ctv region in P. trifoliata.

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Year:  1998        PMID: 9755216      PMCID: PMC1460362     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  10 in total

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Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

3.  Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations.

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Journal:  Proc Natl Acad Sci U S A       Date:  1991-11-01       Impact factor: 11.205

4.  The tomato Cf-2 disease resistance locus comprises two functional genes encoding leucine-rich repeat proteins.

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Journal:  Cell       Date:  1996-02-09       Impact factor: 41.582

5.  RPS2 of Arabidopsis thaliana: a leucine-rich repeat class of plant disease resistance genes.

Authors:  A F Bent; B N Kunkel; D Dahlbeck; K L Brown; R Schmidt; J Giraudat; J Leung; B J Staskawicz
Journal:  Science       Date:  1994-09-23       Impact factor: 47.728

6.  Development of molecular markers linked to a gene controlling fruit acidity in citrus.

Authors:  D Q Fang; C T Federici; M L Roose
Journal:  Genome       Date:  1997-12       Impact factor: 2.166

7.  Development and characterization of SCAR markers linked to the citrus tristeza virus resistance gene from Poncirus trifoliata.

Authors:  Z Deng; S Xiao; S Huang; F G Gmitter
Journal:  Genome       Date:  1997-10       Impact factor: 2.166

8.  Comparative recombination distances among Zea mays L. inbreds, wide crosses and interspecific hybrids.

Authors:  C G Williams; M M Goodman; C W Stuber
Journal:  Genetics       Date:  1995-12       Impact factor: 4.562

9.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736

10.  Fine mapping of quantitative trait loci using selected overlapping recombinant chromosomes, in an interspecies cross of tomato.

Authors:  A H Paterson; J W DeVerna; B Lanini; S D Tanksley
Journal:  Genetics       Date:  1990-03       Impact factor: 4.562

  10 in total
  8 in total

1.  Cloning and characterization of receptor kinase class disease resistance gene candidates in Citrus.

Authors:  Z Deng; F G Gmitter
Journal:  Theor Appl Genet       Date:  2003-09-06       Impact factor: 5.699

2.  Refinement of the Citrus tristeza virus resistance gene (Ctv) positional map in Poncirus trifoliata and generation of transgenic grapefruit (Citrus paradisi) plant lines with candidate resistance genes in this region.

Authors:  Mamta Rai
Journal:  Plant Mol Biol       Date:  2006-06       Impact factor: 4.076

3.  Sequence analysis of a 282-kilobase region surrounding the citrus Tristeza virus resistance gene (Ctv) locus in Poncirus trifoliata L. Raf.

Authors:  Zhong-Nan Yang; Xin-Rong Ye; Joe Molina; Mikeal L Roose; T Erik Mirkov
Journal:  Plant Physiol       Date:  2003-02       Impact factor: 8.340

4.  Mining and characterizing microsatellites from citrus ESTs.

Authors:  Chunxian Chen; Ping Zhou; Young A Choi; Shu Huang; Fred G Gmitter
Journal:  Theor Appl Genet       Date:  2006-02-11       Impact factor: 5.699

5.  QTL analysis of citrus tristeza virus-citradia interaction.

Authors:  M J Asins; G P Bernet; C Ruiz; M Cambra; J Guerri; E A Carbonell
Journal:  Theor Appl Genet       Date:  2003-11-12       Impact factor: 5.699

6.  Expressed sequence enrichment for candidate gene analysis of citrus tristeza virus resistance.

Authors:  G P Bernet; M P Bretó; M J Asins
Journal:  Theor Appl Genet       Date:  2003-11-18       Impact factor: 5.699

7.  Genetically based location from triploid populations and gene ontology of a 3.3-mb genome region linked to Alternaria brown spot resistance in citrus reveal clusters of resistance genes.

Authors:  José Cuenca; Pablo Aleza; Antonio Vicent; Dominique Brunel; Patrick Ollitrault; Luis Navarro
Journal:  PLoS One       Date:  2013-10-08       Impact factor: 3.240

Review 8.  Citrus breeding, genetics and genomics in Japan.

Authors:  Mitsuo Omura; Takehiko Shimada
Journal:  Breed Sci       Date:  2016-01-01       Impact factor: 2.086

  8 in total

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