Literature DB >> 9753734

Creation of genetic information by DNA polymerase of the thermophilic bacterium Thermus thermophilus.

N Ogata1, T Miura.   

Abstract

Genetic information encoded in a template of a genome is replicated in a complementary way by DNA polymerase or RNA polymerase with high fidelity; no creation of information occurs in this reaction unless an error occurs. We report here that DNA polymerase of the thermophilic bacterium Thermus thermophilus can synthesize up to 200 kb linear double-stranded DNA in vitro in the complete absence of added primer and template DNAs, indicating that genetic information is actively created by protein. This ab initio DNA synthesis occurs at 74 degrees C and requires magnesium ion. There is a lag time of approximately 1 h and then the reaction proceeds linearly. The synthesized DNAs have a variety of sequences; they are mostly tandem repetitive sequences, e.g. (CATGTATA) n , (TGTATGTATACATACATA) n and (TATACGTA) n . Some degenerate sequences of these basic repeat units are also found. The similar repetitive sequences are found in many natural genes. These results, together with similar results found using DNA polymerase of archaeon Thermococcus litoralis , suggest that creative, non-replicative synthesis of DNA by protein was a driving force for diversification of genetic information at a certain stage of the evolution of life on the early earth.

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Year:  1998        PMID: 9753734      PMCID: PMC147879          DOI: 10.1093/nar/26.20.4657

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  9 in total

1.  Elongation of repetitive DNA by DNA polymerase from a hyperthermophilic bacterium Thermus thermophilus.

Authors:  N Ogata; H Morino
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

2.  Expansion during PCR of short single-stranded DNA fragments carrying nonselfcomplementary dinucleotide or trinucleotide repeats.

Authors:  Nad'a Reichová; Jaroslav Kypr
Journal:  Mol Biol Rep       Date:  2003-09       Impact factor: 2.316

3.  Linear nicking endonuclease-mediated strand-displacement DNA amplification.

Authors:  Aric Joneja; Xiaohua Huang
Journal:  Anal Biochem       Date:  2011-02-20       Impact factor: 3.365

4.  Synergistic template-free synthesis of dsDNA by Thermococcus nautili primase PolpTN2, DNA polymerase PolB, and pTN2 helicase.

Authors:  Pierre Béguin; Sukhvinder Gill; Nicole Charpin; Patrick Forterre
Journal:  Extremophiles       Date:  2014-11-25       Impact factor: 2.395

5.  Specific versus nonspecific isothermal DNA amplification through thermophilic polymerase and nicking enzyme activities.

Authors:  Eric Tan; Barbara Erwin; Shale Dames; Tanya Ferguson; Megan Buechel; Bruce Irvine; Karl Voelkerding; Angelika Niemz
Journal:  Biochemistry       Date:  2008-08-26       Impact factor: 3.162

6.  Sequence dependence of isothermal DNA amplification via EXPAR.

Authors:  Jifeng Qian; Tanya M Ferguson; Deepali N Shinde; Alissa J Ramírez-Borrero; Arend Hintze; Christoph Adami; Angelika Niemz
Journal:  Nucleic Acids Res       Date:  2012-03-13       Impact factor: 16.971

7.  A highly divergent archaeo-eukaryotic primase from the Thermococcus nautilus plasmid, pTN2.

Authors:  Sukhvinder Gill; Mart Krupovic; Nicole Desnoues; Pierre Béguin; Guennadi Sezonov; Patrick Forterre
Journal:  Nucleic Acids Res       Date:  2014-01-20       Impact factor: 16.971

8.  Boosting functionality of synthetic DNA circuits with tailored deactivation.

Authors:  Kevin Montagne; Guillaume Gines; Teruo Fujii; Yannick Rondelez
Journal:  Nat Commun       Date:  2016-11-15       Impact factor: 14.919

9.  A small-molecule chemical interface for molecular programs.

Authors:  Vasily A Shenshin; Camille Lescanne; Guillaume Gines; Yannick Rondelez
Journal:  Nucleic Acids Res       Date:  2021-07-21       Impact factor: 16.971

  9 in total

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