Literature DB >> 9753733

Creation of genetic information by DNA polymerase of the archaeon Thermococcus litoralis: influences of temperature and ionic strength.

N Ogata1, T Miura.   

Abstract

DNA polymerase of the archaeon Thermococcus litoralis can synthesize a long stretch of linear double-stranded DNA in the complete absence of added primer and template DNAs. This finding suggests that genetic information can potentially be created by protein. We report here the effects of temperature, ionic strength and pH on this ab initio DNA synthesis by the protein in vitro . When the temperature of the reaction was changed, the sequence of the product DNA changed markedly. For instance, the reaction products were (TAAT) n at 69 degrees C, (TATCCGGA) n at 84 degrees C and (TATCGCGATAGCGATCGC) n at 89 degrees C. The ionic strength of the reaction condition also affected the sequence: it was (TATCTAGA) n with 0 mM KCl, (TATATACG) n with 50 mM KCl and (TATAGTTATAAC) n with 100 mM KCl at 74 degrees C. When the pH of the reaction condition was changed from 6.8 to 10.8, the size of the product DNA decreased, but its sequence did not. These results demonstrate that DNA synthesized ab initio by DNA polymerase of T.litoralis is markedly influenced by the reaction conditions. The results also suggest that genetic information that might have been created by protein on the early earth is strongly influenced by environmental factors.

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Year:  1998        PMID: 9753733      PMCID: PMC147899          DOI: 10.1093/nar/26.20.4652

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  8 in total

1.  Elongation of repetitive DNA by DNA polymerase from a hyperthermophilic bacterium Thermus thermophilus.

Authors:  N Ogata; H Morino
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

2.  Template-free primer-independent DNA synthesis by bacterial DNA polymerases I using the DnaB protein from Escherichia coli.

Authors:  O K Kaboev; L A Luchkina
Journal:  Dokl Biochem Biophys       Date:  2004 Sep-Oct       Impact factor: 0.788

3.  Expansion during PCR of short single-stranded DNA fragments carrying nonselfcomplementary dinucleotide or trinucleotide repeats.

Authors:  Nad'a Reichová; Jaroslav Kypr
Journal:  Mol Biol Rep       Date:  2003-09       Impact factor: 2.316

4.  Specific versus nonspecific isothermal DNA amplification through thermophilic polymerase and nicking enzyme activities.

Authors:  Eric Tan; Barbara Erwin; Shale Dames; Tanya Ferguson; Megan Buechel; Bruce Irvine; Karl Voelkerding; Angelika Niemz
Journal:  Biochemistry       Date:  2008-08-26       Impact factor: 3.162

5.  Sequence dependence of isothermal DNA amplification via EXPAR.

Authors:  Jifeng Qian; Tanya M Ferguson; Deepali N Shinde; Alissa J Ramírez-Borrero; Arend Hintze; Christoph Adami; Angelika Niemz
Journal:  Nucleic Acids Res       Date:  2012-03-13       Impact factor: 16.971

6.  Efficient isothermal expansion of human telomeric and minisatellite repeats by Thermococcus litoralis DNA polymerase.

Authors:  Jörg S Hartig; Eric T Kool
Journal:  Nucleic Acids Res       Date:  2005-09-02       Impact factor: 16.971

7.  Sensitive isothermal detection of nucleic-acid sequence by primer generation-rolling circle amplification.

Authors:  Taku Murakami; Jun Sumaoka; Makoto Komiyama
Journal:  Nucleic Acids Res       Date:  2008-12-23       Impact factor: 16.971

8.  Single-ribonucleotide repair-mediated ligation-dependent cycling signal amplification for sensitive and specific detection of DNA methyltransferase.

Authors:  Li-Juan Wang; Xiao Han; Chen-Chen Li; Chun-Yang Zhang
Journal:  Chem Sci       Date:  2018-06-18       Impact factor: 9.825

  8 in total

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